Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z8R

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Z8R entry

There are 3 chains in PDB entry 7Z8R (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ASP 18	ALA 776
D	TYR 6	GLN 1216
R	ARG 21	TYR 106

There are106 helices in PDB entry 7Z8R. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	18	32	Right-handed alpha
Helix 2	AA2	C	38	54	Right-handed alpha
Helix 3	AA3	C	85	105	Right-handed alpha
Helix 4	AA4	C	112	137	Right-handed alpha
Helix 5	AA5	C	137	152	Right-handed alpha
Helix 6	AA6	C	158	171	Right-handed alpha
Helix 7	AA7	C	175	192	Right-handed alpha
Helix 8	AA8	C	197	211	Right-handed alpha
Helix 9	AA9	C	225	232	Right-handed alpha
Helix 10	AB1	C	232	253	Right-handed alpha
Helix 11	AB2	C	256	279	Right-handed alpha
Helix 12	AB3	C	280	282	Right-handed 310
Helix 13	AB4	C	283	297	Right-handed alpha
Helix 14	AB5	C	299	313	Right-handed alpha
Helix 15	AB6	C	315	327	Right-handed alpha
Helix 16	AB7	C	333	356	Right-handed alpha
Helix 17	AB8	C	357	361	Right-handed 310
Helix 18	AB9	C	362	385	Right-handed alpha
Helix 19	AC1	C	388	405	Right-handed alpha
Helix 20	AC2	C	406	413	Right-handed alpha
Helix 21	AC3	C	416	431	Right-handed alpha
Helix 22	AC4	C	441	454	Right-handed alpha
Helix 23	AC5	C	458	476	Right-handed alpha
Helix 24	AC6	C	481	496	Right-handed alpha
Helix 25	AC7	C	498	527	Right-handed alpha
Helix 26	AC8	C	556	558	Right-handed 310
Helix 27	AC9	C	559	574	Right-handed alpha
Helix 28	AD1	C	605	613	Right-handed alpha
Helix 29	AD2	C	614	616	Right-handed 310
Helix 30	AD3	C	622	630	Right-handed alpha
Helix 31	AD4	C	632	646	Right-handed alpha
Helix 32	AD5	C	688	722	Right-handed alpha
Helix 33	AD6	C	727	739	Right-handed alpha
Helix 34	AD7	C	745	759	Right-handed alpha
Helix 35	AD8	D	7	15	Right-handed alpha
Helix 36	AD9	D	19	34	Right-handed alpha
Helix 37	AE1	D	45	57	Right-handed alpha
Helix 38	AE2	D	61	77	Right-handed alpha
Helix 39	AE3	D	80	96	Right-handed alpha
Helix 40	AE4	D	99	117	Right-handed alpha
Helix 41	AE5	D	128	144	Right-handed alpha
Helix 42	AE6	D	147	165	Right-handed alpha
Helix 43	AE7	D	172	181	Right-handed alpha
Helix 44	AE8	D	182	186	Right-handed 310
Helix 45	AE9	D	188	205	Right-handed alpha
Helix 46	AF1	D	207	225	Right-handed alpha
Helix 47	AF2	D	227	245	Right-handed alpha
Helix 48	AF3	D	249	251	Right-handed 310
Helix 49	AF4	D	252	264	Right-handed alpha
Helix 50	AF5	D	268	286	Right-handed alpha
Helix 51	AF6	D	290	292	Right-handed 310
Helix 52	AF7	D	293	306	Right-handed alpha
Helix 53	AF8	D	346	363	Right-handed alpha
Helix 54	AF9	D	367	382	Right-handed alpha
Helix 55	AG1	D	383	385	Right-handed 310
Helix 56	AG2	D	387	406	Right-handed alpha
Helix 57	AG3	D	424	443	Right-handed alpha
Helix 58	AG4	D	447	465	Right-handed alpha
Helix 59	AG5	D	472	485	Right-handed alpha
Helix 60	AG6	D	490	507	Right-handed alpha
Helix 61	AG7	D	509	515	Right-handed 310
Helix 62	AG8	D	516	529	Right-handed alpha
Helix 63	AG9	D	532	551	Right-handed alpha
Helix 64	AH1	D	561	577	Right-handed alpha
Helix 65	AH2	D	582	601	Right-handed alpha
Helix 66	AH3	D	606	619	Right-handed alpha
Helix 67	AH4	D	624	637	Right-handed alpha
Helix 68	AH5	D	644	658	Right-handed alpha
Helix 69	AH6	D	659	661	Right-handed 310
Helix 70	AH7	D	663	681	Right-handed alpha
Helix 71	AH8	D	682	685	Right-handed 310
Helix 72	AH9	D	686	695	Right-handed alpha
Helix 73	AI1	D	705	723	Right-handed alpha
Helix 74	AI2	D	724	730	Right-handed 310
Helix 75	AI3	D	732	743	Right-handed alpha
Helix 76	AI4	D	749	766	Right-handed alpha
Helix 77	AI5	D	771	786	Right-handed alpha
Helix 78	AI6	D	792	810	Right-handed alpha
Helix 79	AI7	D	813	827	Right-handed alpha
Helix 80	AI8	D	831	849	Right-handed alpha
Helix 81	AI9	D	856	866	Right-handed alpha
Helix 82	AJ1	D	869	887	Right-handed alpha
Helix 83	AJ2	D	887	902	Right-handed alpha
Helix 84	AJ3	D	908	919	Right-handed alpha
Helix 85	AJ4	D	921	926	Right-handed alpha
Helix 86	AJ5	D	928	940	Right-handed alpha
Helix 87	AJ6	D	946	961	Right-handed alpha
Helix 88	AJ7	D	962	973	Right-handed alpha
Helix 89	AJ8	D	978	990	Right-handed alpha
Helix 90	AJ9	D	991	993	Right-handed 310
Helix 91	AK1	D	1000	1013	Right-handed alpha
Helix 92	AK2	D	1014	1016	Right-handed 310
Helix 93	AK3	D	1019	1037	Right-handed alpha
Helix 94	AK4	D	1038	1043	Right-handed 310
Helix 95	AK5	D	1044	1055	Right-handed alpha
Helix 96	AK6	D	1078	1096	Right-handed alpha
Helix 97	AK7	D	1103	1113	Right-handed alpha
Helix 98	AK8	D	1116	1131	Right-handed alpha
Helix 99	AK9	D	1134	1141	Right-handed alpha
Helix 100	AL1	D	1141	1154	Right-handed alpha
Helix 101	AL2	D	1162	1185	Right-handed alpha
Helix 102	AL3	D	1192	1205	Right-handed alpha
Helix 103	AL4	D	1205	1215	Right-handed alpha
Helix 104	AL5	R	53	58	Right-handed alpha
Helix 105	AL6	R	62	67	Right-handed alpha
Helix 106	AL7	R	81	88	Right-handed alpha

There are 5 sheets in PDB entry 7Z8R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	541	first strand
Strand 2	R	22	35	parallel
Strand 3	C	577	592	anti-parallel
Strand 4	C	599	604	anti-parallel
Strand 5	C	681	683	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	619	621	first strand
Strand 2	C	668	671	anti-parallel
Strand 3	C	649	650	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	724	726	first strand
Strand 2	C	771	774	anti-parallel
Strand 3	C	762	764	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1064	1068	first strand
Strand 2	D	1071	1075	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	78	80	first strand
Strand 2	R	70	73	anti-parallel
Strand 3	R	103	105	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Z8R

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z8R