Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z8S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Z8S entry

There are 4 chains in PDB entry 7Z8S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 C 1 C 36
B
 G 1 G 36
D
 SER 76ARG 253
E
 ALA 2GLN 1886
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 98 helices in PDB entry 7Z8S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
97 104Right-handed alpha
Helix 2
AA2
D
143 161Right-handed alpha
Helix 3
AA3
D
187 193Right-handed alpha
Helix 4
AA4
D
234 250Right-handed alpha
Helix 5
AA5
D
251 253Right-handed 310
Helix 6
AA6
E
3 11Right-handed alpha
Helix 7
AA7
E
17 35Right-handed alpha
Helix 8
AA8
E
38 47Right-handed alpha
Helix 9
AA9
E
48 52Right-handed 310
Helix 10
AB1
E
54 70Right-handed alpha
Helix 11
AB2
E
313 324Right-handed alpha
Helix 12
AB3
E
329 347Right-handed alpha
Helix 13
AB4
E
348 350Right-handed 310
Helix 14
AB5
E
357 383Right-handed alpha
Helix 15
AB6
E
395 409Right-handed alpha
Helix 16
AB7
E
413 428Right-handed alpha
Helix 17
AB8
E
447 457Right-handed alpha
Helix 18
AB9
E
458 464Right-handed alpha
Helix 19
AC1
E
464 480Right-handed alpha
Helix 20
AC2
E
483 495Right-handed alpha
Helix 21
AC3
E
497 502Right-handed alpha
Helix 22
AC4
E
505 522Right-handed alpha
Helix 23
AC5
E
529 542Right-handed alpha
Helix 24
AC6
E
544 558Right-handed alpha
Helix 25
AC7
E
559 561Right-handed 310
Helix 26
AC8
E
562 567Right-handed alpha
Helix 27
AC9
E
568 576Right-handed 310
Helix 28
AD1
E
578 594Right-handed alpha
Helix 29
AD2
E
605 619Right-handed alpha
Helix 30
AD3
E
621 643Right-handed alpha
Helix 31
AD4
E
643 652Right-handed alpha
Helix 32
AD5
E
654 663Right-handed alpha
Helix 33
AD6
E
676 680Right-handed 310
Helix 34
AD7
E
732 736Right-handed 310
Helix 35
AD8
E
744 766Right-handed alpha
Helix 36
AD9
E
767 770Right-handed 310
Helix 37
AE1
E
771 782Right-handed alpha
Helix 38
AE2
E
786 804Right-handed alpha
Helix 39
AE3
E
806 812Right-handed 310
Helix 40
AE4
E
813 823Right-handed alpha
Helix 41
AE5
E
829 831Right-handed 310
Helix 42
AE6
E
832 853Right-handed alpha
Helix 43
AE7
E
880 899Right-handed alpha
Helix 44
AE8
E
903 947Right-handed alpha
Helix 45
AE9
E
954 968Right-handed alpha
Helix 46
AF1
E
970 991Right-handed alpha
Helix 47
AF2
E
994 1009Right-handed alpha
Helix 48
AF3
E
1010 1015Right-handed 310
Helix 49
AF4
E
1017 1022Right-handed alpha
Helix 50
AF5
E
1028 1035Right-handed 310
Helix 51
AF6
E
1044 1072Right-handed alpha
Helix 52
AF7
E
1074 1079Right-handed alpha
Helix 53
AF8
E
1080 1095Right-handed alpha
Helix 54
AF9
E
1099 1104Right-handed 310
Helix 55
AG1
E
1107 1124Right-handed alpha
Helix 56
AG2
E
1125 1127Right-handed 310
Helix 57
AG3
E
1128 1130Right-handed 310
Helix 58
AG4
E
1131 1147Right-handed alpha
Helix 59
AG5
E
1150 1168Right-handed alpha
Helix 60
AG6
E
1169 1180Right-handed alpha
Helix 61
AG7
E
1181 1186Right-handed 310
Helix 62
AG8
E
1190 1208Right-handed alpha
Helix 63
AG9
E
1209 1212Right-handed 310
Helix 64
AH1
E
1214 1226Right-handed alpha
Helix 65
AH2
E
1230 1248Right-handed alpha
Helix 66
AH3
E
1249 1251Right-handed 310
Helix 67
AH4
E
1261 1280Right-handed alpha
Helix 68
AH5
E
1298 1315Right-handed alpha
Helix 69
AH6
E
1327 1350Right-handed alpha
Helix 70
AH7
E
1352 1356Right-handed 310
Helix 71
AH8
E
1365 1367Right-handed 310
Helix 72
AH9
E
1368 1380Right-handed alpha
Helix 73
AI1
E
1391 1396Right-handed alpha
Helix 74
AI2
E
1397 1399Right-handed 310
Helix 75
AI3
E
1400 1404Right-handed 310
Helix 76
AI4
E
1412 1416Right-handed alpha
Helix 77
AI5
E
1418 1423Right-handed alpha
Helix 78
AI6
E
1434 1439Right-handed 310
Helix 79
AI7
E
1443 1450Right-handed alpha
Helix 80
AI8
E
1468 1480Right-handed alpha
Helix 81
AI9
E
1486 1494Right-handed alpha
Helix 82
AJ1
E
1494 1501Right-handed alpha
Helix 83
AJ2
E
1502 1504Right-handed 310
Helix 84
AJ3
E
1508 1526Right-handed alpha
Helix 85
AJ4
E
1527 1529Right-handed 310
Helix 86
AJ5
E
1533 1538Right-handed alpha
Helix 87
AJ6
E
1554 1566Right-handed alpha
Helix 88
AJ7
E
1587 1598Right-handed alpha
Helix 89
AJ8
E
1632 1643Right-handed alpha
Helix 90
AJ9
E
1645 1650Right-handed alpha
Helix 91
AK1
E
1673 1685Right-handed alpha
Helix 92
AK2
E
1705 1714Right-handed alpha
Helix 93
AK3
E
1749 1758Right-handed alpha
Helix 94
AK4
E
1779 1798Right-handed alpha
Helix 95
AK5
E
1811 1816Right-handed alpha
Helix 96
AK6
E
1856 1861Right-handed alpha
Helix 97
AK7
E
1869 1877Right-handed alpha
Helix 98
AK8
E
1877 1885Right-handed alpha
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There are 3 sheets in PDB entry 7Z8S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
117 121first strand
Strand 2
D
126 130anti-parallel
Strand 3
D
135 139anti-parallel
Strand 4
D
81 90anti-parallel
Strand 5
D
170 180anti-parallel
Strand 6
D
226 230anti-parallel
Strand 7
D
219 221anti-parallel
Strand 8
D
208 210anti-parallel
Strand 9
D
198 199anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1318 1319first strand
Strand 2
E
1457 1459parallel
Strand 3
E
1428 1432parallel
Strand 4
E
1360 1364parallel
Strand 5
E
1407 1411parallel
Strand 6
E
1385 1387parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1544 1551first strand
Strand 2
E
1769 1776parallel
Strand 3
E
1740 1743parallel
Strand 4
E
1667 1671parallel
Strand 5
E
1721 1725parallel
Strand 6
E
1694 1697parallel
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