Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z8V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Z8V entry

There are 5 chains in PDB entry 7Z8V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	LEU 12	ALA 776
D	SER 5	GLN 1216
R	ARG 21	TYR 106
F	VAL 95	LEU 416
S	PRO 2	TRP 159

There are126 helices in PDB entry 7Z8V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	20	32	Right-handed alpha
Helix 2	AA2	C	38	54	Right-handed alpha
Helix 3	AA3	C	87	105	Right-handed alpha
Helix 4	AA4	C	113	137	Right-handed alpha
Helix 5	AA5	C	137	152	Right-handed alpha
Helix 6	AA6	C	158	171	Right-handed alpha
Helix 7	AA7	C	175	192	Right-handed alpha
Helix 8	AA8	C	198	211	Right-handed alpha
Helix 9	AA9	C	225	232	Right-handed alpha
Helix 10	AB1	C	232	255	Right-handed alpha
Helix 11	AB2	C	256	279	Right-handed alpha
Helix 12	AB3	C	280	282	Right-handed 310
Helix 13	AB4	C	283	297	Right-handed alpha
Helix 14	AB5	C	299	313	Right-handed alpha
Helix 15	AB6	C	315	327	Right-handed alpha
Helix 16	AB7	C	333	354	Right-handed alpha
Helix 17	AB8	C	355	361	Right-handed 310
Helix 18	AB9	C	362	385	Right-handed alpha
Helix 19	AC1	C	388	405	Right-handed alpha
Helix 20	AC2	C	406	413	Right-handed alpha
Helix 21	AC3	C	416	431	Right-handed alpha
Helix 22	AC4	C	441	454	Right-handed alpha
Helix 23	AC5	C	458	477	Right-handed alpha
Helix 24	AC6	C	481	496	Right-handed alpha
Helix 25	AC7	C	498	527	Right-handed alpha
Helix 26	AC8	C	559	574	Right-handed alpha
Helix 27	AC9	C	605	613	Right-handed alpha
Helix 28	AD1	C	622	630	Right-handed alpha
Helix 29	AD2	C	632	646	Right-handed alpha
Helix 30	AD3	C	688	722	Right-handed alpha
Helix 31	AD4	C	727	739	Right-handed alpha
Helix 32	AD5	C	745	759	Right-handed alpha
Helix 33	AD6	D	6	15	Right-handed alpha
Helix 34	AD7	D	19	36	Right-handed alpha
Helix 35	AD8	D	42	57	Right-handed alpha
Helix 36	AD9	D	61	78	Right-handed alpha
Helix 37	AE1	D	80	96	Right-handed alpha
Helix 38	AE2	D	99	117	Right-handed alpha
Helix 39	AE3	D	128	144	Right-handed alpha
Helix 40	AE4	D	148	164	Right-handed alpha
Helix 41	AE5	D	169	171	Right-handed 310
Helix 42	AE6	D	172	181	Right-handed alpha
Helix 43	AE7	D	182	186	Right-handed 310
Helix 44	AE8	D	188	205	Right-handed alpha
Helix 45	AE9	D	207	224	Right-handed alpha
Helix 46	AF1	D	227	245	Right-handed alpha
Helix 47	AF2	D	246	251	Right-handed 310
Helix 48	AF3	D	252	265	Right-handed alpha
Helix 49	AF4	D	268	286	Right-handed alpha
Helix 50	AF5	D	287	292	Right-handed 310
Helix 51	AF6	D	293	306	Right-handed alpha
Helix 52	AF7	D	346	364	Right-handed alpha
Helix 53	AF8	D	367	382	Right-handed alpha
Helix 54	AF9	D	383	385	Right-handed 310
Helix 55	AG1	D	387	406	Right-handed alpha
Helix 56	AG2	D	424	443	Right-handed alpha
Helix 57	AG3	D	447	465	Right-handed alpha
Helix 58	AG4	D	472	485	Right-handed alpha
Helix 59	AG5	D	490	507	Right-handed alpha
Helix 60	AG6	D	508	515	Right-handed 310
Helix 61	AG7	D	516	529	Right-handed alpha
Helix 62	AG8	D	532	551	Right-handed alpha
Helix 63	AG9	D	561	563	Right-handed 310
Helix 64	AH1	D	564	577	Right-handed alpha
Helix 65	AH2	D	582	601	Right-handed alpha
Helix 66	AH3	D	606	619	Right-handed alpha
Helix 67	AH4	D	625	637	Right-handed alpha
Helix 68	AH5	D	644	658	Right-handed alpha
Helix 69	AH6	D	663	681	Right-handed alpha
Helix 70	AH7	D	682	685	Right-handed 310
Helix 71	AH8	D	686	695	Right-handed alpha
Helix 72	AH9	D	697	701	Right-handed 310
Helix 73	AI1	D	705	723	Right-handed alpha
Helix 74	AI2	D	724	731	Right-handed 310
Helix 75	AI3	D	732	743	Right-handed alpha
Helix 76	AI4	D	749	766	Right-handed alpha
Helix 77	AI5	D	771	786	Right-handed alpha
Helix 78	AI6	D	793	810	Right-handed alpha
Helix 79	AI7	D	813	826	Right-handed alpha
Helix 80	AI8	D	831	849	Right-handed alpha
Helix 81	AI9	D	856	864	Right-handed alpha
Helix 82	AJ1	D	869	887	Right-handed alpha
Helix 83	AJ2	D	891	902	Right-handed alpha
Helix 84	AJ3	D	908	919	Right-handed alpha
Helix 85	AJ4	D	921	926	Right-handed alpha
Helix 86	AJ5	D	928	940	Right-handed alpha
Helix 87	AJ6	D	946	961	Right-handed alpha
Helix 88	AJ7	D	966	972	Right-handed alpha
Helix 89	AJ8	D	978	991	Right-handed alpha
Helix 90	AJ9	D	1000	1013	Right-handed alpha
Helix 91	AK1	D	1014	1017	Right-handed 310
Helix 92	AK2	D	1019	1037	Right-handed alpha
Helix 93	AK3	D	1038	1043	Right-handed 310
Helix 94	AK4	D	1044	1055	Right-handed alpha
Helix 95	AK5	D	1059	1061	Right-handed 310
Helix 96	AK6	D	1078	1095	Right-handed alpha
Helix 97	AK7	D	1101	1113	Right-handed alpha
Helix 98	AK8	D	1116	1133	Right-handed alpha
Helix 99	AK9	D	1134	1141	Right-handed alpha
Helix 100	AL1	D	1141	1155	Right-handed alpha
Helix 101	AL2	D	1162	1185	Right-handed alpha
Helix 102	AL3	D	1192	1205	Right-handed alpha
Helix 103	AL4	D	1205	1215	Right-handed alpha
Helix 104	AL5	R	53	59	Right-handed alpha
Helix 105	AL6	R	62	67	Right-handed alpha
Helix 106	AL7	R	81	88	Right-handed alpha
Helix 107	AL8	F	101	110	Right-handed alpha
Helix 108	AL9	F	113	121	Right-handed alpha
Helix 109	AM1	F	124	131	Right-handed alpha
Helix 110	AM2	F	148	158	Right-handed alpha
Helix 111	AM3	F	194	203	Right-handed alpha
Helix 112	AM4	F	219	227	Right-handed alpha
Helix 113	AM5	F	244	255	Right-handed alpha
Helix 114	AM6	F	270	280	Right-handed alpha
Helix 115	AM7	F	298	309	Right-handed alpha
Helix 116	AM8	F	324	334	Right-handed alpha
Helix 117	AM9	F	349	359	Right-handed 310
Helix 118	AN1	F	374	383	Right-handed alpha
Helix 119	AN2	S	18	22	Right-handed alpha
Helix 120	AN3	S	24	29	Right-handed alpha
Helix 121	AN4	S	51	65	Right-handed alpha
Helix 122	AN5	S	87	94	Right-handed alpha
Helix 123	AN6	S	96	111	Right-handed alpha
Helix 124	AN7	S	112	127	Right-handed alpha
Helix 125	AN8	S	131	140	Right-handed alpha
Helix 126	AN9	S	146	157	Right-handed alpha

There are 10 sheets in PDB entry 7Z8V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	541	first strand
Strand 2	R	22	35	parallel
Strand 3	C	577	592	anti-parallel
Strand 4	C	599	604	anti-parallel
Strand 5	C	681	683	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	619	621	first strand
Strand 2	C	668	671	anti-parallel
Strand 3	C	649	650	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	724	726	first strand
Strand 2	C	771	774	anti-parallel
Strand 3	C	762	764	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1063	1068	first strand
Strand 2	D	1071	1076	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	78	80	first strand
Strand 2	R	70	73	anti-parallel
Strand 3	R	103	105	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	139	141	first strand
Strand 2	F	162	164	parallel
Strand 3	F	185	187	parallel
Strand 4	F	210	212	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	169	170	first strand
Strand 2	F	192	193	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	260	262	first strand
Strand 2	F	287	289	parallel
Strand 3	F	314	316	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	339	341	first strand
Strand 2	F	364	366	parallel
Strand 3	F	387	388	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	13	17	first strand
Strand 2	S	3	7	anti-parallel
Strand 3	S	45	46	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Z8V

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z8V