Analysis of interatomic Contacts of Structural Units in PDB entry:
7Z8W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Z8W entry

There are 2 chains in PDB entry 7Z8W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 407HIS 549
B
 HIS 395LYS 548
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 7Z8W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
419 430Right-handed alpha
Helix 2
AA2
A
435 450Right-handed alpha
Helix 3
AA3
A
508 510Right-handed 310
Helix 4
AA4
A
522 526Right-handed 310
Helix 5
AA5
A
533 547Right-handed alpha
Helix 6
AA6
B
399 405Right-handed alpha
Helix 7
AA7
B
419 430Right-handed alpha
Helix 8
AA8
B
435 450Right-handed alpha
Helix 9
AA9
B
508 510Right-handed 310
Helix 10
AB1
B
522 526Right-handed 310
Helix 11
AB2
B
533 547Right-handed alpha
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There are 2 sheets in PDB entry 7Z8W. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
495 506anti-parallel
Strand 3
A
466 473anti-parallel
Strand 4
A
455 461anti-parallel
Strand 5
A
411 417parallel
Strand 6
A
531 532anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
431 432first strand
Strand 2
B
495 506anti-parallel
Strand 3
B
466 473anti-parallel
Strand 4
B
455 461anti-parallel
Strand 5
B
411 417parallel
Strand 6
B
531 532anti-parallel
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