Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZBC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZBC entry

There are 2 chains in PDB entry 7ZBC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1CYS 322
B
 MET 1CYS 322
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 7ZBC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 65Right-handed alpha
Helix 2
AA2
A
70 90Right-handed alpha
Helix 3
AA3
A
90 101Right-handed alpha
Helix 4
AA4
A
105 141Right-handed alpha
Helix 5
AA5
A
149 169Right-handed alpha
Helix 6
AA6
A
170 173Right-handed 310
Helix 7
AA7
A
195 198Right-handed 310
Helix 8
AA8
A
199 211Right-handed alpha
Helix 9
AA9
A
212 228Right-handed alpha
Helix 10
AB1
A
246 278Right-handed alpha
Helix 11
AB2
A
285 295Right-handed alpha
Helix 12
AB3
A
296 299Right-handed 310
Helix 13
AB4
A
300 310Right-handed alpha
Helix 14
AB5
A
310 322Right-handed alpha
Helix 15
AB6
B
33 65Right-handed alpha
Helix 16
AB7
B
70 90Right-handed alpha
Helix 17
AB8
B
90 101Right-handed alpha
Helix 18
AB9
B
105 141Right-handed alpha
Helix 19
AC1
B
149 169Right-handed alpha
Helix 20
AC2
B
170 173Right-handed 310
Helix 21
AC3
B
195 198Right-handed 310
Helix 22
AC4
B
199 211Right-handed alpha
Helix 23
AC5
B
212 228Right-handed alpha
Helix 24
AC6
B
245 278Right-handed alpha
Helix 25
AC7
B
285 295Right-handed alpha
Helix 26
AC8
B
296 299Right-handed 310
Helix 27
AC9
B
300 310Right-handed alpha
Helix 28
AD1
B
310 322Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 7ZBC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 6first strand
Strand 2
A
9 11anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 181first strand
Strand 2
A
186 189anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 5first strand
Strand 2
B
10 11anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 181first strand
Strand 2
B
186 189anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il