Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZBO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZBO entry

There are 4 chains in PDB entry 7ZBO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 4	LEU 351
B	PRO 9	LEU 351
C	SER 8	LEU 351
D	SER 8	LEU 351

There are 59 helices in PDB entry 7ZBO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	18	31	Right-handed alpha
Helix 2	AA2	A	49	54	Right-handed alpha
Helix 3	AA3	A	65	67	Right-handed 310
Helix 4	AA4	A	68	76	Right-handed alpha
Helix 5	AA5	A	88	102	Right-handed alpha
Helix 6	AA6	A	110	115	Right-handed 310
Helix 7	AA7	A	120	134	Right-handed alpha
Helix 8	AA8	A	142	147	Right-handed alpha
Helix 9	AA9	A	148	157	Right-handed alpha
Helix 10	AB1	A	176	184	Right-handed alpha
Helix 11	AB2	A	189	195	Right-handed alpha
Helix 12	AB3	A	210	223	Right-handed alpha
Helix 13	AB4	A	311	322	Right-handed alpha
Helix 14	AB5	A	323	330	Right-handed alpha
Helix 15	AB6	A	336	340	Right-handed 310
Helix 16	AB7	B	18	31	Right-handed alpha
Helix 17	AB8	B	65	67	Right-handed 310
Helix 18	AB9	B	68	76	Right-handed alpha
Helix 19	AC1	B	88	102	Right-handed alpha
Helix 20	AC2	B	110	115	Right-handed 310
Helix 21	AC3	B	120	134	Right-handed alpha
Helix 22	AC4	B	142	147	Right-handed alpha
Helix 23	AC5	B	148	157	Right-handed alpha
Helix 24	AC6	B	177	184	Right-handed alpha
Helix 25	AC7	B	189	195	Right-handed alpha
Helix 26	AC8	B	210	223	Right-handed alpha
Helix 27	AC9	B	311	322	Right-handed alpha
Helix 28	AD1	B	323	330	Right-handed alpha
Helix 29	AD2	B	336	340	Right-handed 310
Helix 30	AD3	C	18	31	Right-handed alpha
Helix 31	AD4	C	49	54	Right-handed alpha
Helix 32	AD5	C	65	67	Right-handed 310
Helix 33	AD6	C	68	76	Right-handed alpha
Helix 34	AD7	C	88	102	Right-handed alpha
Helix 35	AD8	C	110	115	Right-handed 310
Helix 36	AD9	C	120	134	Right-handed alpha
Helix 37	AE1	C	142	147	Right-handed alpha
Helix 38	AE2	C	148	157	Right-handed alpha
Helix 39	AE3	C	174	176	Right-handed 310
Helix 40	AE4	C	179	184	Right-handed alpha
Helix 41	AE5	C	210	223	Right-handed alpha
Helix 42	AE6	C	311	322	Right-handed alpha
Helix 43	AE7	C	323	330	Right-handed alpha
Helix 44	AE8	C	336	340	Right-handed 310
Helix 45	AE9	D	18	31	Right-handed alpha
Helix 46	AF1	D	49	54	Right-handed alpha
Helix 47	AF2	D	65	67	Right-handed 310
Helix 48	AF3	D	68	76	Right-handed alpha
Helix 49	AF4	D	88	102	Right-handed alpha
Helix 50	AF5	D	110	115	Right-handed 310
Helix 51	AF6	D	120	134	Right-handed alpha
Helix 52	AF7	D	142	147	Right-handed alpha
Helix 53	AF8	D	148	157	Right-handed alpha
Helix 54	AF9	D	174	176	Right-handed 310
Helix 55	AG1	D	179	184	Right-handed alpha
Helix 56	AG2	D	210	223	Right-handed alpha
Helix 57	AG3	D	311	322	Right-handed alpha
Helix 58	AG4	D	323	330	Right-handed alpha
Helix 59	AG5	D	336	340	Right-handed 310

There are 12 sheets in PDB entry 7ZBO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	64	first strand
Strand 2	A	34	40	parallel
Strand 3	A	10	15	parallel
Strand 4	A	80	83	parallel
Strand 5	A	105	108	parallel
Strand 6	A	137	140	parallel
Strand 7	A	333	334	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	227	237	first strand
Strand 2	A	259	268	anti-parallel
Strand 3	A	273	281	anti-parallel
Strand 4	A	161	172	parallel
Strand 5	A	290	298	anti-parallel
Strand 6	A	303	308	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	245	first strand
Strand 2	A	250	252	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	64	first strand
Strand 2	B	34	40	parallel
Strand 3	B	10	15	parallel
Strand 4	B	80	83	parallel
Strand 5	B	105	108	parallel
Strand 6	B	137	140	parallel
Strand 7	B	333	334	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	227	237	first strand
Strand 2	B	259	268	anti-parallel
Strand 3	B	273	281	anti-parallel
Strand 4	B	161	172	parallel
Strand 5	B	290	298	anti-parallel
Strand 6	B	303	308	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	243	245	first strand
Strand 2	B	250	252	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	64	first strand
Strand 2	C	34	40	parallel
Strand 3	C	10	15	parallel
Strand 4	C	80	83	parallel
Strand 5	C	105	108	parallel
Strand 6	C	137	140	parallel
Strand 7	C	333	334	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	227	237	first strand
Strand 2	C	259	268	anti-parallel
Strand 3	C	273	281	anti-parallel
Strand 4	C	161	172	parallel
Strand 5	C	290	298	anti-parallel
Strand 6	C	303	308	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	243	245	first strand
Strand 2	C	250	252	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	63	64	first strand
Strand 2	D	34	40	parallel
Strand 3	D	10	15	parallel
Strand 4	D	80	83	parallel
Strand 5	D	105	108	parallel
Strand 6	D	137	140	parallel
Strand 7	D	333	334	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	227	237	first strand
Strand 2	D	259	268	anti-parallel
Strand 3	D	273	281	anti-parallel
Strand 4	D	161	172	parallel
Strand 5	D	290	298	anti-parallel
Strand 6	D	303	308	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	243	245	first strand
Strand 2	D	250	252	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZBO

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZBO