Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZBZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZBZ entry

There are 5 chains in PDB entry 7ZBZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	GLN 14	ALA 776
D	SER 5	GLN 1216
R	ARG 21	TYR 106
S	PRO 2	TRP 159
F	VAL 95	LEU 416

There are128 helices in PDB entry 7ZBZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	16	32	Right-handed alpha
Helix 2	AA2	C	38	55	Right-handed alpha
Helix 3	AA3	C	85	107	Right-handed alpha
Helix 4	AA4	C	111	137	Right-handed alpha
Helix 5	AA5	C	137	143	Right-handed alpha
Helix 6	AA6	C	143	152	Right-handed alpha
Helix 7	AA7	C	158	171	Right-handed alpha
Helix 8	AA8	C	171	193	Right-handed alpha
Helix 9	AA9	C	198	212	Right-handed alpha
Helix 10	AB1	C	225	232	Right-handed alpha
Helix 11	AB2	C	232	255	Right-handed alpha
Helix 12	AB3	C	256	279	Right-handed alpha
Helix 13	AB4	C	280	282	Right-handed 310
Helix 14	AB5	C	283	297	Right-handed alpha
Helix 15	AB6	C	299	313	Right-handed alpha
Helix 16	AB7	C	315	327	Right-handed alpha
Helix 17	AB8	C	333	356	Right-handed alpha
Helix 18	AB9	C	357	361	Right-handed 310
Helix 19	AC1	C	362	385	Right-handed alpha
Helix 20	AC2	C	388	405	Right-handed alpha
Helix 21	AC3	C	406	413	Right-handed alpha
Helix 22	AC4	C	416	431	Right-handed alpha
Helix 23	AC5	C	441	454	Right-handed alpha
Helix 24	AC6	C	458	477	Right-handed alpha
Helix 25	AC7	C	481	496	Right-handed alpha
Helix 26	AC8	C	498	528	Right-handed alpha
Helix 27	AC9	C	556	558	Right-handed 310
Helix 28	AD1	C	559	574	Right-handed alpha
Helix 29	AD2	C	605	613	Right-handed alpha
Helix 30	AD3	C	622	630	Right-handed alpha
Helix 31	AD4	C	632	646	Right-handed alpha
Helix 32	AD5	C	688	722	Right-handed alpha
Helix 33	AD6	C	726	739	Right-handed alpha
Helix 34	AD7	C	745	759	Right-handed alpha
Helix 35	AD8	D	6	15	Right-handed alpha
Helix 36	AD9	D	19	36	Right-handed alpha
Helix 37	AE1	D	43	57	Right-handed alpha
Helix 38	AE2	D	61	79	Right-handed alpha
Helix 39	AE3	D	80	96	Right-handed alpha
Helix 40	AE4	D	99	116	Right-handed alpha
Helix 41	AE5	D	128	144	Right-handed alpha
Helix 42	AE6	D	147	164	Right-handed alpha
Helix 43	AE7	D	165	171	Right-handed 310
Helix 44	AE8	D	172	181	Right-handed alpha
Helix 45	AE9	D	182	186	Right-handed 310
Helix 46	AF1	D	188	205	Right-handed alpha
Helix 47	AF2	D	207	224	Right-handed alpha
Helix 48	AF3	D	227	245	Right-handed alpha
Helix 49	AF4	D	246	251	Right-handed 310
Helix 50	AF5	D	252	265	Right-handed alpha
Helix 51	AF6	D	268	286	Right-handed alpha
Helix 52	AF7	D	290	292	Right-handed 310
Helix 53	AF8	D	293	305	Right-handed alpha
Helix 54	AF9	D	346	364	Right-handed alpha
Helix 55	AG1	D	367	382	Right-handed alpha
Helix 56	AG2	D	383	385	Right-handed 310
Helix 57	AG3	D	387	406	Right-handed alpha
Helix 58	AG4	D	424	443	Right-handed alpha
Helix 59	AG5	D	447	465	Right-handed alpha
Helix 60	AG6	D	472	485	Right-handed alpha
Helix 61	AG7	D	490	507	Right-handed alpha
Helix 62	AG8	D	508	515	Right-handed 310
Helix 63	AG9	D	516	529	Right-handed alpha
Helix 64	AH1	D	532	551	Right-handed alpha
Helix 65	AH2	D	561	577	Right-handed alpha
Helix 66	AH3	D	582	601	Right-handed alpha
Helix 67	AH4	D	606	621	Right-handed alpha
Helix 68	AH5	D	625	637	Right-handed alpha
Helix 69	AH6	D	644	658	Right-handed alpha
Helix 70	AH7	D	659	661	Right-handed 310
Helix 71	AH8	D	663	681	Right-handed alpha
Helix 72	AH9	D	686	695	Right-handed alpha
Helix 73	AI1	D	705	723	Right-handed alpha
Helix 74	AI2	D	724	731	Right-handed 310
Helix 75	AI3	D	732	743	Right-handed alpha
Helix 76	AI4	D	749	766	Right-handed alpha
Helix 77	AI5	D	771	786	Right-handed alpha
Helix 78	AI6	D	793	810	Right-handed alpha
Helix 79	AI7	D	813	827	Right-handed alpha
Helix 80	AI8	D	831	849	Right-handed alpha
Helix 81	AI9	D	856	866	Right-handed alpha
Helix 82	AJ1	D	869	887	Right-handed alpha
Helix 83	AJ2	D	887	902	Right-handed alpha
Helix 84	AJ3	D	905	919	Right-handed alpha
Helix 85	AJ4	D	921	926	Right-handed alpha
Helix 86	AJ5	D	928	940	Right-handed alpha
Helix 87	AJ6	D	947	960	Right-handed alpha
Helix 88	AJ7	D	962	976	Right-handed alpha
Helix 89	AJ8	D	978	990	Right-handed alpha
Helix 90	AJ9	D	991	993	Right-handed 310
Helix 91	AK1	D	1000	1013	Right-handed alpha
Helix 92	AK2	D	1014	1017	Right-handed 310
Helix 93	AK3	D	1019	1037	Right-handed alpha
Helix 94	AK4	D	1038	1041	Right-handed 310
Helix 95	AK5	D	1044	1055	Right-handed alpha
Helix 96	AK6	D	1059	1063	Right-handed 310
Helix 97	AK7	D	1078	1096	Right-handed alpha
Helix 98	AK8	D	1101	1113	Right-handed alpha
Helix 99	AK9	D	1116	1133	Right-handed alpha
Helix 100	AL1	D	1134	1141	Right-handed alpha
Helix 101	AL2	D	1146	1154	Right-handed alpha
Helix 102	AL3	D	1162	1185	Right-handed alpha
Helix 103	AL4	D	1194	1205	Right-handed alpha
Helix 104	AL5	D	1205	1216	Right-handed alpha
Helix 105	AL6	R	53	59	Right-handed alpha
Helix 106	AL7	R	62	67	Right-handed alpha
Helix 107	AL8	R	81	88	Right-handed alpha
Helix 108	AL9	S	18	22	Right-handed alpha
Helix 109	AM1	S	24	33	Right-handed alpha
Helix 110	AM2	S	51	65	Right-handed alpha
Helix 111	AM3	S	87	94	Right-handed alpha
Helix 112	AM4	S	96	111	Right-handed alpha
Helix 113	AM5	S	112	128	Right-handed alpha
Helix 114	AM6	S	131	140	Right-handed alpha
Helix 115	AM7	S	146	156	Right-handed alpha
Helix 116	AM8	F	96	100	Right-handed 310
Helix 117	AM9	F	101	110	Right-handed alpha
Helix 118	AN1	F	113	121	Right-handed alpha
Helix 119	AN2	F	124	132	Right-handed alpha
Helix 120	AN3	F	148	158	Right-handed alpha
Helix 121	AN4	F	194	203	Right-handed alpha
Helix 122	AN5	F	219	227	Right-handed alpha
Helix 123	AN6	F	244	255	Right-handed alpha
Helix 124	AN7	F	270	280	Right-handed alpha
Helix 125	AN8	F	298	309	Right-handed alpha
Helix 126	AN9	F	324	334	Right-handed alpha
Helix 127	AO1	F	349	359	Right-handed 310
Helix 128	AO2	F	374	383	Right-handed alpha

There are 9 sheets in PDB entry 7ZBZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	541	first strand
Strand 2	R	22	35	parallel
Strand 3	C	577	592	anti-parallel
Strand 4	C	599	604	anti-parallel
Strand 5	C	681	683	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	619	621	first strand
Strand 2	C	668	670	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	724	725	first strand
Strand 2	C	772	774	anti-parallel
Strand 3	C	762	764	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	79	80	first strand
Strand 2	R	70	73	anti-parallel
Strand 3	R	103	105	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	13	17	first strand
Strand 2	S	3	7	anti-parallel
Strand 3	S	45	46	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	139	141	first strand
Strand 2	F	162	164	parallel
Strand 3	F	185	187	parallel
Strand 4	F	210	212	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	169	170	first strand
Strand 2	F	192	193	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	260	262	first strand
Strand 2	F	287	289	parallel
Strand 3	F	314	316	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	339	341	first strand
Strand 2	F	364	366	parallel
Strand 3	F	387	388	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZBZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZBZ