Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZC9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZC9 entry

There are 2 chains in PDB entry 7ZC9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
SER 829LYS 1017
A
SER 829LYS 1017
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 7ZC9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
B
850 855Right-handed alpha
Helix 2
AA2
B
971 976Right-handed alpha
Helix 3
AA3
A
850 855Right-handed alpha
Helix 4
AA4
A
971 976Right-handed alpha
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There are 6 sheets in PDB entry 7ZC9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
947 950first strand
Strand 2
B
936 941anti-parallel
Strand 3
B
926 933anti-parallel
Strand 4
B
861 870anti-parallel
Strand 5
B
985 993anti-parallel
Strand 6
B
997 998anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
947 950first strand
Strand 2
B
936 941anti-parallel
Strand 3
B
926 933anti-parallel
Strand 4
B
861 870anti-parallel
Strand 5
B
985 993anti-parallel
Strand 6
B
838 841anti-parallel
Strand 7
B
1012 1013anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
911 916first strand
Strand 2
B
900 906anti-parallel
Strand 3
B
891 897anti-parallel
Strand 4
B
875 881anti-parallel
Strand 5
B
964 966anti-parallel
Strand 6
B
845 848anti-parallel
Strand 7
B
1007 1009anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
947 950first strand
Strand 2
A
936 941anti-parallel
Strand 3
A
926 933anti-parallel
Strand 4
A
861 870anti-parallel
Strand 5
A
985 993anti-parallel
Strand 6
A
997 998anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
947 950first strand
Strand 2
A
936 941anti-parallel
Strand 3
A
926 933anti-parallel
Strand 4
A
861 870anti-parallel
Strand 5
A
985 993anti-parallel
Strand 6
A
838 841anti-parallel
Strand 7
A
1012 1013anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
911 916first strand
Strand 2
A
900 906anti-parallel
Strand 3
A
891 897anti-parallel
Strand 4
A
875 881anti-parallel
Strand 5
A
964 966anti-parallel
Strand 6
A
845 848anti-parallel
Strand 7
A
1007 1009anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il