Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZCT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZCT entry

There are 4 chains in PDB entry 7ZCT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 7PHE 66
A
 SER 70SER 223
B
 ALA 7PHE 66
B
 SER 70SER 223
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 7ZCT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 66Right-handed 310
Helix 2
AA2
A
70 74Right-handed 310
Helix 3
AA3
A
82 87Right-handed alpha
Helix 4
AA4
B
58 66Right-handed 310
Helix 5
AA5
B
70 74Right-handed 310
Helix 6
AA6
B
82 87Right-handed alpha
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There are 2 sheets in PDB entry 7ZCT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 144first strand
Strand 2
A
157 168anti-parallel
Strand 3
A
173 184anti-parallel
Strand 4
A
92 100anti-parallel
Strand 5
A
105 115anti-parallel
Strand 6
A
118 128anti-parallel
Strand 7
A
13 23parallel
Strand 8
A
26 37anti-parallel
Strand 9
A
42 51anti-parallel
Strand 10
A
211 222anti-parallel
Strand 11
A
194 205anti-parallel
Strand 12
A
147 154anti-parallel
Strand 13
A
157 168anti-parallel
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There are 13 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 144first strand
Strand 2
B
157 168anti-parallel
Strand 3
B
173 184anti-parallel
Strand 4
B
92 100anti-parallel
Strand 5
B
105 115anti-parallel
Strand 6
B
118 128anti-parallel
Strand 7
B
13 23parallel
Strand 8
B
26 36anti-parallel
Strand 9
B
42 51anti-parallel
Strand 10
B
211 222anti-parallel
Strand 11
B
194 205anti-parallel
Strand 12
B
147 154anti-parallel
Strand 13
B
157 168anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il