Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZDG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZDG entry

There are 2 chains in PDB entry 7ZDG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1LEU 573
D
 ASN 2ILE 588
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 7ZDG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
4 10Right-handed alpha
Helix 2
AA2
C
11 13Right-handed 310
Helix 3
AA3
C
14 50Right-handed alpha
Helix 4
AA4
C
51 54Right-handed 310
Helix 5
AA5
C
59 104Right-handed alpha
Helix 6
AA6
C
106 111Right-handed alpha
Helix 7
AA7
C
117 131Right-handed alpha
Helix 8
AA8
C
132 137Right-handed alpha
Helix 9
AA9
C
137 156Right-handed alpha
Helix 10
AB1
C
159 185Right-handed alpha
Helix 11
AB2
C
185 209Right-handed alpha
Helix 12
AB3
C
209 216Right-handed alpha
Helix 13
AB4
C
220 269Right-handed alpha
Helix 14
AB5
C
277 291Right-handed alpha
Helix 15
AB6
C
296 319Right-handed alpha
Helix 16
AB7
C
381 387Right-handed alpha
Helix 17
AB8
C
403 407Right-handed 310
Helix 18
AB9
C
408 415Right-handed alpha
Helix 19
AC1
C
429 436Right-handed alpha
Helix 20
AC2
C
442 453Right-handed alpha
Helix 21
AC3
C
462 466Right-handed 310
Helix 22
AC4
C
468 472Right-handed 310
Helix 23
AC5
C
476 492Right-handed alpha
Helix 24
AC6
C
506 521Right-handed alpha
Helix 25
AC7
C
535 539Right-handed 310
Helix 26
AC8
C
555 562Right-handed alpha
Helix 27
AC9
C
564 570Right-handed alpha
Helix 28
AD1
D
4 16Right-handed alpha
Helix 29
AD2
D
17 19Right-handed 310
Helix 30
AD3
D
20 54Right-handed alpha
Helix 31
AD4
D
58 61Right-handed 310
Helix 32
AD5
D
62 110Right-handed alpha
Helix 33
AD6
D
110 115Right-handed alpha
Helix 34
AD7
D
118 127Right-handed alpha
Helix 35
AD8
D
127 132Right-handed alpha
Helix 36
AD9
D
133 139Right-handed alpha
Helix 37
AE1
D
139 159Right-handed alpha
Helix 38
AE2
D
162 173Right-handed alpha
Helix 39
AE3
D
174 183Right-handed alpha
Helix 40
AE4
D
185 211Right-handed alpha
Helix 41
AE5
D
211 218Right-handed alpha
Helix 42
AE6
D
220 247Right-handed alpha
Helix 43
AE7
D
247 273Right-handed alpha
Helix 44
AE8
D
286 310Right-handed alpha
Helix 45
AE9
D
310 328Right-handed alpha
Helix 46
AF1
D
388 397Right-handed alpha
Helix 47
AF2
D
417 422Right-handed alpha
Helix 48
AF3
D
438 444Right-handed alpha
Helix 49
AF4
D
451 462Right-handed alpha
Helix 50
AF5
D
473 477Right-handed 310
Helix 51
AF6
D
487 501Right-handed alpha
Helix 52
AF7
D
517 532Right-handed alpha
Helix 53
AF8
D
543 547Right-handed 310
Helix 54
AF9
D
566 574Right-handed alpha
Helix 55
AG1
D
575 586Right-handed alpha
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There are 5 sheets in PDB entry 7ZDG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
339 342first strand
Strand 2
C
396 399anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
416 419first strand
Strand 2
C
495 499parallel
Strand 3
C
525 530parallel
Strand 4
C
368 373parallel
Strand 5
C
541 546parallel
Strand 6
C
549 554anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
364 369first strand
Strand 2
D
350 358anti-parallel
Strand 3
D
372 373anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
364 369first strand
Strand 2
D
350 358anti-parallel
Strand 3
D
401 407anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
425 429first strand
Strand 2
D
506 510parallel
Strand 3
D
536 540parallel
Strand 4
D
378 382parallel
Strand 5
D
552 557parallel
Strand 6
D
560 565anti-parallel
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