Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZDL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZDL entry

There are 2 chains in PDB entry 7ZDL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1GLY 572
D
 ARG 5GLU 586
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 7ZDL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
4 12Right-handed alpha
Helix 2
AA2
C
14 50Right-handed alpha
Helix 3
AA3
C
61 70Right-handed alpha
Helix 4
AA4
C
70 104Right-handed alpha
Helix 5
AA5
C
115 137Right-handed alpha
Helix 6
AA6
C
137 157Right-handed alpha
Helix 7
AA7
C
162 176Right-handed alpha
Helix 8
AA8
C
176 185Right-handed alpha
Helix 9
AA9
C
185 209Right-handed alpha
Helix 10
AB1
C
209 216Right-handed alpha
Helix 11
AB2
C
220 242Right-handed alpha
Helix 12
AB3
C
245 269Right-handed alpha
Helix 13
AB4
C
278 291Right-handed alpha
Helix 14
AB5
C
294 299Right-handed alpha
Helix 15
AB6
C
301 319Right-handed alpha
Helix 16
AB7
C
378 387Right-handed alpha
Helix 17
AB8
C
403 407Right-handed 310
Helix 18
AB9
C
408 415Right-handed alpha
Helix 19
AC1
C
429 435Right-handed alpha
Helix 20
AC2
C
442 453Right-handed alpha
Helix 21
AC3
C
455 460Right-handed 310
Helix 22
AC4
C
462 466Right-handed 310
Helix 23
AC5
C
476 492Right-handed alpha
Helix 24
AC6
C
506 521Right-handed alpha
Helix 25
AC7
C
522 524Right-handed 310
Helix 26
AC8
C
535 539Right-handed 310
Helix 27
AC9
C
555 562Right-handed alpha
Helix 28
AD1
C
564 571Right-handed alpha
Helix 29
AD2
D
6 17Right-handed alpha
Helix 30
AD3
D
20 54Right-handed alpha
Helix 31
AD4
D
62 110Right-handed alpha
Helix 32
AD5
D
110 115Right-handed alpha
Helix 33
AD6
D
118 123Right-handed alpha
Helix 34
AD7
D
123 128Right-handed alpha
Helix 35
AD8
D
130 132Right-handed 310
Helix 36
AD9
D
133 139Right-handed alpha
Helix 37
AE1
D
139 147Right-handed alpha
Helix 38
AE2
D
149 159Right-handed alpha
Helix 39
AE3
D
164 172Right-handed alpha
Helix 40
AE4
D
174 185Right-handed alpha
Helix 41
AE5
D
193 198Right-handed alpha
Helix 42
AE6
D
203 211Right-handed alpha
Helix 43
AE7
D
211 219Right-handed alpha
Helix 44
AE8
D
220 239Right-handed alpha
Helix 45
AE9
D
239 247Right-handed alpha
Helix 46
AF1
D
247 274Right-handed alpha
Helix 47
AF2
D
287 295Right-handed alpha
Helix 48
AF3
D
296 310Right-handed alpha
Helix 49
AF4
D
310 330Right-handed alpha
Helix 50
AF5
D
390 398Right-handed alpha
Helix 51
AF6
D
417 422Right-handed alpha
Helix 52
AF7
D
438 444Right-handed alpha
Helix 53
AF8
D
451 462Right-handed alpha
Helix 54
AF9
D
473 477Right-handed 310
Helix 55
AG1
D
487 492Right-handed alpha
Helix 56
AG2
D
493 498Right-handed alpha
Helix 57
AG3
D
517 531Right-handed alpha
Helix 58
AG4
D
566 572Right-handed alpha
Helix 59
AG5
D
577 581Right-handed 310
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There are 5 sheets in PDB entry 7ZDL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
356 362first strand
Strand 2
C
339 346anti-parallel
Strand 3
C
397 399anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
416 419first strand
Strand 2
C
495 499parallel
Strand 3
C
528 530parallel
Strand 4
C
370 372parallel
Strand 5
C
542 545parallel
Strand 6
C
550 554anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
370 373first strand
Strand 2
D
350 353anti-parallel
Strand 3
D
405 408anti-parallel
Strand 4
D
411 412anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
379 383first strand
Strand 2
D
552 557parallel
Strand 3
D
560 561anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
425 427first strand
Strand 2
D
506 508parallel
Strand 3
D
536 537parallel
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