Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZDS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZDS entry

There are 2 chains in PDB entry 7ZDS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1GLY 564
D
 SER 4ALA 568
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 7ZDS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
4 12Right-handed alpha
Helix 2
AA2
C
15 50Right-handed alpha
Helix 3
AA3
C
59 104Right-handed alpha
Helix 4
AA4
C
109 113Right-handed 310
Helix 5
AA5
C
115 131Right-handed alpha
Helix 6
AA6
C
132 137Right-handed alpha
Helix 7
AA7
C
137 156Right-handed alpha
Helix 8
AA8
C
159 175Right-handed alpha
Helix 9
AA9
C
176 185Right-handed alpha
Helix 10
AB1
C
185 208Right-handed alpha
Helix 11
AB2
C
209 215Right-handed alpha
Helix 12
AB3
C
220 269Right-handed alpha
Helix 13
AB4
C
278 290Right-handed alpha
Helix 14
AB5
C
296 316Right-handed alpha
Helix 15
AB6
C
378 387Right-handed alpha
Helix 16
AB7
C
408 415Right-handed alpha
Helix 17
AB8
C
429 435Right-handed alpha
Helix 18
AB9
C
442 454Right-handed alpha
Helix 19
AC1
C
480 492Right-handed alpha
Helix 20
AC2
C
506 521Right-handed alpha
Helix 21
AC3
C
534 539Right-handed 310
Helix 22
AC4
D
5 17Right-handed alpha
Helix 23
AC5
D
22 54Right-handed alpha
Helix 24
AC6
D
59 61Right-handed 310
Helix 25
AC7
D
62 115Right-handed alpha
Helix 26
AC8
D
118 127Right-handed alpha
Helix 27
AC9
D
127 132Right-handed alpha
Helix 28
AD1
D
133 138Right-handed alpha
Helix 29
AD2
D
139 159Right-handed alpha
Helix 30
AD3
D
164 194Right-handed alpha
Helix 31
AD4
D
194 203Right-handed alpha
Helix 32
AD5
D
203 210Right-handed alpha
Helix 33
AD6
D
211 218Right-handed alpha
Helix 34
AD7
D
223 274Right-handed alpha
Helix 35
AD8
D
286 311Right-handed alpha
Helix 36
AD9
D
311 330Right-handed alpha
Helix 37
AE1
D
390 398Right-handed alpha
Helix 38
AE2
D
417 422Right-handed alpha
Helix 39
AE3
D
438 444Right-handed alpha
Helix 40
AE4
D
451 462Right-handed alpha
Helix 41
AE5
D
473 477Right-handed 310
Helix 42
AE6
D
487 501Right-handed alpha
Helix 43
AE7
D
517 529Right-handed alpha
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There are 4 sheets in PDB entry 7ZDS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
359 362first strand
Strand 2
C
339 344anti-parallel
Strand 3
C
396 399anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
416 419first strand
Strand 2
C
495 499parallel
Strand 3
C
525 530parallel
Strand 4
C
368 372parallel
Strand 5
C
541 546parallel
Strand 6
C
549 553anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
364 373first strand
Strand 2
D
350 358anti-parallel
Strand 3
D
401 408anti-parallel
Strand 4
D
411 412anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
425 428first strand
Strand 2
D
506 510parallel
Strand 3
D
536 540parallel
Strand 4
D
379 383parallel
Strand 5
D
552 556parallel
Strand 6
D
561 565anti-parallel
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