Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZDU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZDU entry

There are 2 chains in PDB entry 7ZDU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1GLN 563
D
 ASN 2GLU 586
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 7ZDU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
1 3Right-handed 310
Helix 2
AA2
C
4 9Right-handed alpha
Helix 3
AA3
C
10 13Right-handed 310
Helix 4
AA4
C
14 50Right-handed alpha
Helix 5
AA5
C
51 55Right-handed 310
Helix 6
AA6
C
60 101Right-handed alpha
Helix 7
AA7
C
110 114Right-handed 310
Helix 8
AA8
C
115 131Right-handed alpha
Helix 9
AA9
C
131 137Right-handed alpha
Helix 10
AB1
C
138 157Right-handed alpha
Helix 11
AB2
C
159 209Right-handed alpha
Helix 12
AB3
C
209 216Right-handed alpha
Helix 13
AB4
C
218 269Right-handed alpha
Helix 14
AB5
C
278 290Right-handed alpha
Helix 15
AB6
C
291 294Right-handed 310
Helix 16
AB7
C
299 319Right-handed alpha
Helix 17
AB8
C
378 386Right-handed alpha
Helix 18
AB9
C
405 407Right-handed 310
Helix 19
AC1
C
408 415Right-handed alpha
Helix 20
AC2
C
429 435Right-handed alpha
Helix 21
AC3
C
442 454Right-handed alpha
Helix 22
AC4
C
455 459Right-handed 310
Helix 23
AC5
C
462 466Right-handed 310
Helix 24
AC6
C
476 492Right-handed alpha
Helix 25
AC7
C
506 521Right-handed alpha
Helix 26
AC8
C
555 563Right-handed alpha
Helix 27
AC9
D
3 16Right-handed alpha
Helix 28
AD1
D
17 19Right-handed 310
Helix 29
AD2
D
20 54Right-handed alpha
Helix 30
AD3
D
63 110Right-handed alpha
Helix 31
AD4
D
110 115Right-handed alpha
Helix 32
AD5
D
118 127Right-handed alpha
Helix 33
AD6
D
127 132Right-handed alpha
Helix 34
AD7
D
133 139Right-handed alpha
Helix 35
AD8
D
139 157Right-handed alpha
Helix 36
AD9
D
162 173Right-handed alpha
Helix 37
AE1
D
174 184Right-handed alpha
Helix 38
AE2
D
186 211Right-handed alpha
Helix 39
AE3
D
211 218Right-handed alpha
Helix 40
AE4
D
220 272Right-handed alpha
Helix 41
AE5
D
286 330Right-handed alpha
Helix 42
AE6
D
388 397Right-handed alpha
Helix 43
AE7
D
417 423Right-handed alpha
Helix 44
AE8
D
438 444Right-handed alpha
Helix 45
AE9
D
451 462Right-handed alpha
Helix 46
AF1
D
463 467Right-handed 310
Helix 47
AF2
D
473 477Right-handed 310
Helix 48
AF3
D
487 502Right-handed alpha
Helix 49
AF4
D
517 532Right-handed alpha
Helix 50
AF5
D
566 573Right-handed alpha
Helix 51
AF6
D
574 584Right-handed alpha
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There are 5 sheets in PDB entry 7ZDU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
356 363first strand
Strand 2
C
339 346anti-parallel
Strand 3
C
396 399anti-parallel
Strand 4
C
402 403anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
416 419first strand
Strand 2
C
495 499parallel
Strand 3
C
525 529parallel
Strand 4
C
368 373parallel
Strand 5
C
541 545parallel
Strand 6
C
550 554anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
364 373first strand
Strand 2
D
350 358anti-parallel
Strand 3
D
401 402anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
364 373first strand
Strand 2
D
350 358anti-parallel
Strand 3
D
405 408anti-parallel
Strand 4
D
411 412anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
425 428first strand
Strand 2
D
506 510parallel
Strand 3
D
536 540parallel
Strand 4
D
378 383parallel
Strand 5
D
552 557parallel
Strand 6
D
560 565anti-parallel
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