Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZDW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZDW entry

There are 2 chains in PDB entry 7ZDW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1LEU 573
D
 LYS 3ILE 588
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 7ZDW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
4 9Right-handed alpha
Helix 2
AA2
C
10 13Right-handed 310
Helix 3
AA3
C
16 50Right-handed alpha
Helix 4
AA4
C
51 55Right-handed 310
Helix 5
AA5
C
59 104Right-handed alpha
Helix 6
AA6
C
115 120Right-handed alpha
Helix 7
AA7
C
120 131Right-handed alpha
Helix 8
AA8
C
137 156Right-handed alpha
Helix 9
AA9
C
159 176Right-handed alpha
Helix 10
AB1
C
177 185Right-handed alpha
Helix 11
AB2
C
185 209Right-handed alpha
Helix 12
AB3
C
209 215Right-handed alpha
Helix 13
AB4
C
223 266Right-handed alpha
Helix 14
AB5
C
277 291Right-handed alpha
Helix 15
AB6
C
298 319Right-handed alpha
Helix 16
AB7
C
382 387Right-handed alpha
Helix 17
AB8
C
403 407Right-handed 310
Helix 18
AB9
C
408 415Right-handed alpha
Helix 19
AC1
C
442 454Right-handed alpha
Helix 20
AC2
C
455 460Right-handed 310
Helix 21
AC3
C
476 491Right-handed alpha
Helix 22
AC4
C
506 521Right-handed alpha
Helix 23
AC5
C
555 563Right-handed alpha
Helix 24
AC6
C
564 571Right-handed alpha
Helix 25
AC7
D
4 17Right-handed alpha
Helix 26
AC8
D
18 21Right-handed 310
Helix 27
AC9
D
22 54Right-handed alpha
Helix 28
AD1
D
63 109Right-handed alpha
Helix 29
AD2
D
110 115Right-handed alpha
Helix 30
AD3
D
118 127Right-handed alpha
Helix 31
AD4
D
130 132Right-handed 310
Helix 32
AD5
D
133 139Right-handed alpha
Helix 33
AD6
D
139 159Right-handed alpha
Helix 34
AD7
D
164 183Right-handed alpha
Helix 35
AD8
D
183 211Right-handed alpha
Helix 36
AD9
D
211 218Right-handed alpha
Helix 37
AE1
D
224 247Right-handed alpha
Helix 38
AE2
D
247 273Right-handed alpha
Helix 39
AE3
D
287 310Right-handed alpha
Helix 40
AE4
D
310 330Right-handed alpha
Helix 41
AE5
D
388 397Right-handed alpha
Helix 42
AE6
D
417 422Right-handed alpha
Helix 43
AE7
D
423 425Right-handed 310
Helix 44
AE8
D
438 444Right-handed alpha
Helix 45
AE9
D
451 462Right-handed alpha
Helix 46
AF1
D
464 468Right-handed 310
Helix 47
AF2
D
473 477Right-handed 310
Helix 48
AF3
D
487 500Right-handed alpha
Helix 49
AF4
D
517 532Right-handed alpha
Helix 50
AF5
D
533 535Right-handed 310
Helix 51
AF6
D
543 547Right-handed 310
Helix 52
AF7
D
566 573Right-handed alpha
Helix 53
AF8
D
575 587Right-handed alpha
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There are 5 sheets in PDB entry 7ZDW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
339 342first strand
Strand 2
C
396 399anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
416 419first strand
Strand 2
C
495 498parallel
Strand 3
C
525 530parallel
Strand 4
C
369 373parallel
Strand 5
C
542 546parallel
Strand 6
C
549 554anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
372 373first strand
Strand 2
D
350 353anti-parallel
Strand 3
D
405 408anti-parallel
Strand 4
D
411 412anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
364 369first strand
Strand 2
D
355 358anti-parallel
Strand 3
D
401 402anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
426 427first strand
Strand 2
D
506 510parallel
Strand 3
D
536 540parallel
Strand 4
D
379 382parallel
Strand 5
D
552 557parallel
Strand 6
D
560 563anti-parallel
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