Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZED


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZED entry

There are 6 chains in PDB entry 7ZED (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 28VAL 145
B
 ILE 208TYR 210
B
 ASN 212ARG 213
B
 THR 215THR 215
B
 LYS 217CYS 218
B
 ARG 220TYR 221
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 7ZED. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
115 119Right-handed 310
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There are 3 sheets in PDB entry 7ZED. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
B
209 212parallel
Strand 3
B
219 220anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 45first strand
Strand 2
A
52 55anti-parallel
Strand 3
A
72 75anti-parallel
Strand 4
A
85 97anti-parallel
Strand 5
A
65 69anti-parallel
Strand 6
A
58 62anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 45first strand
Strand 2
A
52 55anti-parallel
Strand 3
A
72 75anti-parallel
Strand 4
A
85 97anti-parallel
Strand 5
A
105 114anti-parallel
Strand 6
A
121 130anti-parallel
Strand 7
A
135 143anti-parallel
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