Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZEJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZEJ entry

There are 2 chains in PDB entry 7ZEJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 22HIS 362
B
 SER 22PRO 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 7ZEJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 39Right-handed alpha
Helix 2
AA2
A
68 74Right-handed alpha
Helix 3
AA3
A
100 105Right-handed 310
Helix 4
AA4
A
129 131Right-handed 310
Helix 5
AA5
A
138 144Right-handed alpha
Helix 6
AA6
A
146 159Right-handed alpha
Helix 7
AA7
A
176 187Right-handed alpha
Helix 8
AA8
A
197 207Right-handed alpha
Helix 9
AA9
A
219 228Right-handed alpha
Helix 10
AB1
A
241 250Right-handed alpha
Helix 11
AB2
A
262 266Right-handed 310
Helix 12
AB3
A
279 288Right-handed alpha
Helix 13
AB4
A
295 301Right-handed 310
Helix 14
AB5
A
302 316Right-handed alpha
Helix 15
AB6
A
336 338Right-handed 310
Helix 16
AB7
A
339 349Right-handed alpha
Helix 17
AB8
B
35 39Right-handed alpha
Helix 18
AB9
B
68 74Right-handed alpha
Helix 19
AC1
B
100 105Right-handed 310
Helix 20
AC2
B
129 131Right-handed 310
Helix 21
AC3
B
138 143Right-handed alpha
Helix 22
AC4
B
146 159Right-handed alpha
Helix 23
AC5
B
176 187Right-handed alpha
Helix 24
AC6
B
197 207Right-handed alpha
Helix 25
AC7
B
219 228Right-handed alpha
Helix 26
AC8
B
240 250Right-handed alpha
Helix 27
AC9
B
262 266Right-handed 310
Helix 28
AD1
B
279 288Right-handed alpha
Helix 29
AD2
B
295 301Right-handed 310
Helix 30
AD3
B
302 316Right-handed alpha
Helix 31
AD4
B
338 349Right-handed alpha
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There are 8 sheets in PDB entry 7ZEJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 29first strand
Strand 2
A
40 47anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 127first strand
Strand 2
A
55 64anti-parallel
Strand 3
A
90 98anti-parallel
Strand 4
A
111 115anti-parallel
Strand 5
A
132 133anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 127first strand
Strand 2
A
55 64anti-parallel
Strand 3
A
355 359anti-parallel
Strand 4
A
323 324parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 214first strand
Strand 2
A
190 195parallel
Strand 3
A
166 169parallel
Strand 4
A
232 237parallel
Strand 5
A
251 259parallel
Strand 6
A
290 293parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 29first strand
Strand 2
B
40 47anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 127first strand
Strand 2
B
55 64anti-parallel
Strand 3
B
90 98anti-parallel
Strand 4
B
111 115anti-parallel
Strand 5
B
132 133anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 127first strand
Strand 2
B
55 64anti-parallel
Strand 3
B
355 359anti-parallel
Strand 4
B
323 324parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 214first strand
Strand 2
B
190 195parallel
Strand 3
B
166 169parallel
Strand 4
B
232 237parallel
Strand 5
B
251 259parallel
Strand 6
B
290 293parallel
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