Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZGJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZGJ entry

There are 3 chains in PDB entry 7ZGJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 23	PRO 665
B	VAL 673	ASN 1663
C	THR 35	ALA 312

There are 42 helices in PDB entry 7ZGJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	77	81	Right-handed 310
Helix 2	AA2	A	303	311	Right-handed alpha
Helix 3	AA3	A	522	526	Right-handed 310
Helix 4	AA4	A	600	606	Right-handed alpha
Helix 5	AA5	A	612	623	Right-handed alpha
Helix 6	AA6	A	634	643	Right-handed alpha
Helix 7	AA7	B	674	685	Right-handed alpha
Helix 8	AA8	B	691	699	Right-handed alpha
Helix 9	AA9	B	706	712	Right-handed alpha
Helix 10	AB1	B	717	739	Right-handed alpha
Helix 11	AB2	B	987	996	Right-handed alpha
Helix 12	AB3	B	999	1004	Right-handed 310
Helix 13	AB4	B	1012	1017	Right-handed 310
Helix 14	AB5	B	1018	1031	Right-handed alpha
Helix 15	AB6	B	1033	1038	Right-handed alpha
Helix 16	AB7	B	1040	1057	Right-handed alpha
Helix 17	AB8	B	1058	1060	Right-handed 310
Helix 18	AB9	B	1075	1091	Right-handed alpha
Helix 19	AC1	B	1096	1110	Right-handed alpha
Helix 20	AC2	B	1135	1154	Right-handed alpha
Helix 21	AC3	B	1164	1179	Right-handed alpha
Helix 22	AC4	B	1185	1200	Right-handed alpha
Helix 23	AC5	B	1204	1213	Right-handed alpha
Helix 24	AC6	B	1226	1244	Right-handed alpha
Helix 25	AC7	B	1248	1258	Right-handed alpha
Helix 26	AC8	B	1268	1285	Right-handed alpha
Helix 27	AC9	B	1414	1424	Right-handed alpha
Helix 28	AD1	B	1509	1515	Right-handed alpha
Helix 29	AD2	B	1528	1537	Right-handed alpha
Helix 30	AD3	B	1590	1595	Right-handed alpha
Helix 31	AD4	B	1609	1611	Right-handed 310
Helix 32	AD5	B	1644	1655	Right-handed alpha
Helix 33	AD6	C	36	55	Right-handed alpha
Helix 34	AD7	C	55	63	Right-handed alpha
Helix 35	AD8	C	65	85	Right-handed alpha
Helix 36	AD9	C	92	97	Right-handed 310
Helix 37	AE1	C	99	119	Right-handed alpha
Helix 38	AE2	C	120	145	Right-handed alpha
Helix 39	AE3	C	203	211	Right-handed 310
Helix 40	AE4	C	215	226	Right-handed alpha
Helix 41	AE5	C	260	300	Right-handed alpha
Helix 42	AE6	C	304	312	Right-handed alpha

There are 23 sheets in PDB entry 7ZGJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	88	first strand
Strand 2	A	40	47	anti-parallel
Strand 3	A	25	31	anti-parallel
Strand 4	A	644	648	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	35	first strand
Strand 2	A	116	124	parallel
Strand 3	A	105	111	anti-parallel
Strand 4	A	54	61	anti-parallel
Strand 5	A	69	75	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	134	first strand
Strand 2	A	144	152	anti-parallel
Strand 3	A	191	194	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	138	139	first strand
Strand 2	A	218	224	parallel
Strand 3	A	203	210	anti-parallel
Strand 4	A	162	168	anti-parallel
Strand 5	A	174	181	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	233	238	first strand
Strand 2	A	251	258	anti-parallel
Strand 3	A	298	302	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	280	293	first strand
Strand 2	A	267	277	anti-parallel
Strand 3	A	323	332	anti-parallel
Strand 4	A	338	347	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	364	first strand
Strand 2	A	438	445	parallel
Strand 3	A	420	426	anti-parallel
Strand 4	A	389	391	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	370	375	first strand
Strand 2	A	406	411	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	455	460	first strand
Strand 2	A	469	478	anti-parallel
Strand 3	A	514	521	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	499	507	first strand
Strand 2	A	489	496	anti-parallel
Strand 3	A	528	537	anti-parallel
Strand 4	A	545	554	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	564	566	first strand
Strand 2	A	584	587	anti-parallel
Strand 3	B	787	790	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	580	581	first strand
Strand 2	B	793	794	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	771	777	first strand
Strand 2	A	592	599	anti-parallel
Strand 3	B	801	809	anti-parallel
Strand 4	B	815	817	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	771	777	first strand
Strand 2	A	592	599	anti-parallel
Strand 3	B	801	809	anti-parallel
Strand 4	B	821	824	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	829	834	first strand
Strand 2	B	848	853	anti-parallel
Strand 3	B	892	897	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	839	840	first strand
Strand 2	B	924	932	parallel
Strand 3	B	906	916	anti-parallel
Strand 4	B	860	866	anti-parallel
Strand 5	B	882	888	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	844	845	first strand
Strand 2	B	1469	1470	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	872	874	first strand
Strand 2	B	900	902	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	936	947	first strand
Strand 2	B	1340	1350	anti-parallel
Strand 3	B	977	983	anti-parallel
Strand 4	B	1319	1324	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	958	962	first strand
Strand 2	B	1330	1335	anti-parallel
Strand 3	B	1293	1299	anti-parallel
Strand 4	B	1307	1312	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1364	1369	first strand
Strand 2	B	1382	1389	anti-parallel
Strand 3	B	1460	1465	anti-parallel
Strand 4	B	1411	1413	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1431	1432	first strand
Strand 2	B	1443	1447	anti-parallel
Strand 3	B	1401	1406	anti-parallel
Strand 4	B	1476	1481	anti-parallel
Strand 5	B	1488	1491	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1620	1621	first strand
Strand 2	B	1584	1587	parallel
Strand 3	B	1558	1570	anti-parallel
Strand 4	B	1541	1553	anti-parallel
Strand 5	B	1601	1607	anti-parallel
Strand 6	B	1626	1630	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZGJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZGJ