Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZGK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZGK entry

There are 3 chains in PDB entry 7ZGK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 23	GLN 664
B	ASP 752	ASN 1663
C	THR 35	ALA 312

There are 40 helices in PDB entry 7ZGK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	77	81	Right-handed 310
Helix 2	AA2	A	285	288	Right-handed 310
Helix 3	AA3	A	303	311	Right-handed alpha
Helix 4	AA4	A	315	320	Right-handed 310
Helix 5	AA5	A	448	452	Right-handed 310
Helix 6	AA6	A	480	484	Right-handed 310
Helix 7	AA7	A	600	606	Right-handed alpha
Helix 8	AA8	A	612	623	Right-handed alpha
Helix 9	AA9	A	634	643	Right-handed alpha
Helix 10	AB1	B	997	1004	Right-handed 310
Helix 11	AB2	B	1011	1032	Right-handed alpha
Helix 12	AB3	B	1033	1038	Right-handed alpha
Helix 13	AB4	B	1040	1059	Right-handed alpha
Helix 14	AB5	B	1075	1089	Right-handed alpha
Helix 15	AB6	B	1096	1112	Right-handed alpha
Helix 16	AB7	B	1130	1134	Right-handed 310
Helix 17	AB8	B	1138	1156	Right-handed alpha
Helix 18	AB9	B	1164	1179	Right-handed alpha
Helix 19	AC1	B	1180	1183	Right-handed 310
Helix 20	AC2	B	1185	1198	Right-handed alpha
Helix 21	AC3	B	1204	1213	Right-handed alpha
Helix 22	AC4	B	1214	1218	Right-handed 310
Helix 23	AC5	B	1225	1244	Right-handed alpha
Helix 24	AC6	B	1248	1259	Right-handed alpha
Helix 25	AC7	B	1268	1285	Right-handed alpha
Helix 26	AC8	B	1414	1423	Right-handed alpha
Helix 27	AC9	B	1430	1435	Right-handed alpha
Helix 28	AD1	B	1528	1536	Right-handed alpha
Helix 29	AD2	B	1588	1594	Right-handed alpha
Helix 30	AD3	B	1639	1659	Right-handed alpha
Helix 31	AD4	C	36	55	Right-handed alpha
Helix 32	AD5	C	55	63	Right-handed alpha
Helix 33	AD6	C	65	85	Right-handed alpha
Helix 34	AD7	C	92	97	Right-handed 310
Helix 35	AD8	C	99	119	Right-handed alpha
Helix 36	AD9	C	120	145	Right-handed alpha
Helix 37	AE1	C	203	211	Right-handed 310
Helix 38	AE2	C	215	226	Right-handed alpha
Helix 39	AE3	C	260	300	Right-handed alpha
Helix 40	AE4	C	304	312	Right-handed alpha

There are 25 sheets in PDB entry 7ZGK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	89	first strand
Strand 2	A	39	47	anti-parallel
Strand 3	A	25	31	anti-parallel
Strand 4	A	644	648	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	35	first strand
Strand 2	A	116	124	parallel
Strand 3	A	105	111	anti-parallel
Strand 4	A	53	61	anti-parallel
Strand 5	A	68	76	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	134	first strand
Strand 2	A	144	152	anti-parallel
Strand 3	A	188	194	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	138	139	first strand
Strand 2	A	218	224	parallel
Strand 3	A	202	210	anti-parallel
Strand 4	A	163	168	anti-parallel
Strand 5	A	174	180	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	238	first strand
Strand 2	A	251	259	anti-parallel
Strand 3	A	298	302	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	283	first strand
Strand 2	A	267	276	anti-parallel
Strand 3	A	289	293	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	283	first strand
Strand 2	A	267	276	anti-parallel
Strand 3	A	323	332	anti-parallel
Strand 4	A	338	347	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	356	first strand
Strand 2	A	370	377	anti-parallel
Strand 3	A	406	411	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	364	first strand
Strand 2	A	438	445	parallel
Strand 3	A	420	426	anti-parallel
Strand 4	A	388	391	anti-parallel
Strand 5	A	399	400	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	455	459	first strand
Strand 2	A	470	478	anti-parallel
Strand 3	A	514	520	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	500	507	first strand
Strand 2	A	489	495	anti-parallel
Strand 3	A	528	538	anti-parallel
Strand 4	A	544	554	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	564	567	first strand
Strand 2	A	580	587	anti-parallel
Strand 3	B	787	794	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	770	771	first strand
Strand 2	A	591	599	anti-parallel
Strand 3	B	801	810	anti-parallel
Strand 4	B	815	817	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	775	777	first strand
Strand 2	A	591	599	anti-parallel
Strand 3	B	801	810	anti-parallel
Strand 4	B	821	824	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	763	764	first strand
Strand 2	B	922	932	parallel
Strand 3	B	838	840	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	763	764	first strand
Strand 2	B	922	932	parallel
Strand 3	B	906	916	anti-parallel
Strand 4	B	860	866	anti-parallel
Strand 5	B	883	888	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	829	834	first strand
Strand 2	B	845	853	anti-parallel
Strand 3	B	892	894	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	829	834	first strand
Strand 2	B	845	853	anti-parallel
Strand 3	B	898	900	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	936	947	first strand
Strand 2	B	1340	1350	anti-parallel
Strand 3	B	977	984	anti-parallel
Strand 4	B	1320	1324	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	959	962	first strand
Strand 2	B	1330	1333	anti-parallel
Strand 3	B	1293	1299	anti-parallel
Strand 4	B	1307	1312	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1362	1368	first strand
Strand 2	B	1384	1391	anti-parallel
Strand 3	B	1460	1465	anti-parallel
Strand 4	B	1411	1413	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1427	1428	first strand
Strand 2	B	1443	1448	anti-parallel
Strand 3	B	1401	1406	anti-parallel
Strand 4	B	1475	1481	anti-parallel
Strand 5	B	1484	1493	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1504	1507	first strand
Strand 2	B	1510	1513	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1568	1570	first strand
Strand 2	B	1543	1549	anti-parallel
Strand 3	B	1600	1606	anti-parallel
Strand 4	B	1627	1630	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1551	1553	first strand
Strand 2	B	1559	1564	anti-parallel
Strand 3	B	1581	1586	anti-parallel
Strand 4	B	1620	1621	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZGK

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZGK