Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZHH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZHH entry

There are 2 chains in PDB entry 7ZHH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 7ASP 236
C
 A 1 A 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 7ZHH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 40Right-handed 310
Helix 2
AA2
A
43 47Right-handed 310
Helix 3
AA3
A
101 105Right-handed 310
Helix 4
AA4
A
132 136Right-handed 310
Helix 5
AA5
A
188 190Right-handed 310
Helix 6
AA6
A
198 200Right-handed 310
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There are 3 sheets in PDB entry 7ZHH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 17first strand
Strand 2
A
21 26anti-parallel
Strand 3
A
32 36anti-parallel
Strand 4
A
72 77parallel
Strand 5
A
52 57anti-parallel
Strand 6
A
9 17anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 131first strand
Strand 2
A
113 118anti-parallel
Strand 3
A
93 99anti-parallel
Strand 4
A
148 153anti-parallel
Strand 5
A
159 165anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 177first strand
Strand 2
A
180 186anti-parallel
Strand 3
A
192 196anti-parallel
Strand 4
A
226 233parallel
Strand 5
A
212 219anti-parallel
Strand 6
A
169 177anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il