Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZJI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZJI entry

There are 4 chains in PDB entry 7ZJI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PHE 75GLU 716
A
 PHE 75GLU 716
C
 PHE 75GLU 716
D
 PHE 75GLU 716
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are108 helices in PDB entry 7ZJI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
100 108Right-handed alpha
Helix 2
AA2
B
119 124Right-handed alpha
Helix 3
AA3
B
132 135Right-handed 310
Helix 4
AA4
B
136 141Right-handed alpha
Helix 5
AA5
B
166 174Right-handed alpha
Helix 6
AA6
B
177 186Right-handed alpha
Helix 7
AA7
B
212 220Right-handed alpha
Helix 8
AA8
B
222 231Right-handed alpha
Helix 9
AA9
B
248 256Right-handed alpha
Helix 10
AB1
B
260 282Right-handed alpha
Helix 11
AB2
B
297 306Right-handed alpha
Helix 12
AB3
B
308 316Right-handed alpha
Helix 13
AB4
B
320 324Right-handed 310
Helix 14
AB5
B
355 362Right-handed alpha
Helix 15
AB6
B
368 372Right-handed 310
Helix 16
AB7
B
375 387Right-handed alpha
Helix 17
AB8
B
389 413Right-handed alpha
Helix 18
AB9
B
430 459Right-handed alpha
Helix 19
AC1
B
470 490Right-handed alpha
Helix 20
AC2
B
491 493Right-handed 310
Helix 21
AC3
B
494 495Right-handed 310
Helix 22
AC4
B
496 512Right-handed alpha
Helix 23
AC5
B
513 515Right-handed 310
Helix 24
AC6
B
522 543Right-handed alpha
Helix 25
AC7
B
546 559Right-handed alpha
Helix 26
AC8
B
593 606Right-handed alpha
Helix 27
AC9
B
627 650Right-handed alpha
Helix 28
AD1
B
654 674Right-handed alpha
Helix 29
AD2
A
100 108Right-handed alpha
Helix 30
AD3
A
119 125Right-handed alpha
Helix 31
AD4
A
132 135Right-handed 310
Helix 32
AD5
A
136 141Right-handed alpha
Helix 33
AD6
A
166 174Right-handed alpha
Helix 34
AD7
A
177 186Right-handed alpha
Helix 35
AD8
A
212 220Right-handed alpha
Helix 36
AD9
A
222 231Right-handed alpha
Helix 37
AE1
A
248 256Right-handed alpha
Helix 38
AE2
A
260 282Right-handed alpha
Helix 39
AE3
A
297 306Right-handed alpha
Helix 40
AE4
A
308 316Right-handed alpha
Helix 41
AE5
A
320 324Right-handed 310
Helix 42
AE6
A
355 362Right-handed alpha
Helix 43
AE7
A
375 387Right-handed alpha
Helix 44
AE8
A
389 413Right-handed alpha
Helix 45
AE9
A
430 459Right-handed alpha
Helix 46
AF1
A
470 492Right-handed alpha
Helix 47
AF2
A
496 516Right-handed alpha
Helix 48
AF3
A
525 533Right-handed alpha
Helix 49
AF4
A
535 543Right-handed alpha
Helix 50
AF5
A
547 556Right-handed alpha
Helix 51
AF6
A
595 605Right-handed alpha
Helix 52
AF7
A
622 627Right-handed alpha
Helix 53
AF8
A
628 647Right-handed alpha
Helix 54
AF9
A
654 674Right-handed alpha
Helix 55
AG1
C
100 107Right-handed alpha
Helix 56
AG2
C
119 125Right-handed alpha
Helix 57
AG3
C
132 135Right-handed 310
Helix 58
AG4
C
136 141Right-handed alpha
Helix 59
AG5
C
166 174Right-handed alpha
Helix 60
AG6
C
177 186Right-handed alpha
Helix 61
AG7
C
212 220Right-handed alpha
Helix 62
AG8
C
222 231Right-handed alpha
Helix 63
AG9
C
248 256Right-handed alpha
Helix 64
AH1
C
260 282Right-handed alpha
Helix 65
AH2
C
297 306Right-handed alpha
Helix 66
AH3
C
308 316Right-handed alpha
Helix 67
AH4
C
320 324Right-handed 310
Helix 68
AH5
C
355 362Right-handed alpha
Helix 69
AH6
C
368 372Right-handed 310
Helix 70
AH7
C
375 387Right-handed alpha
Helix 71
AH8
C
389 413Right-handed alpha
Helix 72
AH9
C
430 459Right-handed alpha
Helix 73
AI1
C
470 491Right-handed alpha
Helix 74
AI2
C
496 516Right-handed alpha
Helix 75
AI3
C
522 534Right-handed alpha
Helix 76
AI4
C
535 541Right-handed alpha
Helix 77
AI5
C
547 559Right-handed alpha
Helix 78
AI6
C
592 606Right-handed alpha
Helix 79
AI7
C
624 650Right-handed alpha
Helix 80
AI8
C
654 674Right-handed alpha
Helix 81
AI9
D
100 107Right-handed alpha
Helix 82
AJ1
D
119 124Right-handed alpha
Helix 83
AJ2
D
132 135Right-handed 310
Helix 84
AJ3
D
136 141Right-handed alpha
Helix 85
AJ4
D
166 174Right-handed alpha
Helix 86
AJ5
D
177 186Right-handed alpha
Helix 87
AJ6
D
212 220Right-handed alpha
Helix 88
AJ7
D
222 231Right-handed alpha
Helix 89
AJ8
D
248 256Right-handed alpha
Helix 90
AJ9
D
260 282Right-handed alpha
Helix 91
AK1
D
297 306Right-handed alpha
Helix 92
AK2
D
308 316Right-handed alpha
Helix 93
AK3
D
320 324Right-handed 310
Helix 94
AK4
D
355 362Right-handed alpha
Helix 95
AK5
D
368 372Right-handed 310
Helix 96
AK6
D
375 388Right-handed alpha
Helix 97
AK7
D
389 413Right-handed alpha
Helix 98
AK8
D
430 459Right-handed alpha
Helix 99
AK9
D
471 491Right-handed alpha
Helix 100
AL1
D
496 516Right-handed alpha
Helix 101
AL2
D
522 528Right-handed alpha
Helix 102
AL3
D
532 537Right-handed alpha
Helix 103
AL4
D
539 544Right-handed alpha
Helix 104
AL5
D
544 557Right-handed alpha
Helix 105
AL6
D
593 604Right-handed alpha
Helix 106
AL7
D
625 649Right-handed alpha
Helix 107
AL8
D
654 674Right-handed alpha
Helix 108
AL9
D
711 715Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 7ZJI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 331first strand
Strand 2
B
341 344anti-parallel
Strand 3
B
703 707anti-parallel
Strand 4
B
687 688anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 331first strand
Strand 2
A
341 344anti-parallel
Strand 3
A
704 707anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
329 331first strand
Strand 2
C
341 344anti-parallel
Strand 3
C
704 707anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
329 331first strand
Strand 2
D
341 344anti-parallel
Strand 3
D
703 707anti-parallel
Strand 4
D
687 688anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il