Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZJO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZJO entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 5 chains in PDB entry 7ZJO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2ASP 157
A
 VAL 159GLY 316
B
 VAL 3ASP 157
B
 VAL 159GLY 316
C
 VAL 3SER 40
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 7ZJO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 19Right-handed alpha
Helix 2
AA2
A
22 26Right-handed 310
Helix 3
AA3
A
27 39Right-handed alpha
Helix 4
AA4
A
96 108Right-handed alpha
Helix 5
AA5
A
125 141Right-handed alpha
Helix 6
AA6
A
141 146Right-handed alpha
Helix 7
AA7
A
158 175Right-handed alpha
Helix 8
AA8
A
195 201Right-handed alpha
Helix 9
AA9
A
208 220Right-handed alpha
Helix 10
AB1
A
232 236Right-handed 310
Helix 11
AB2
A
237 242Right-handed alpha
Helix 12
AB3
A
257 271Right-handed alpha
Helix 13
AB4
A
290 294Right-handed 310
Helix 14
AB5
A
296 316Right-handed alpha
Helix 15
AB6
B
5 15Right-handed alpha
Helix 16
AB7
B
22 26Right-handed 310
Helix 17
AB8
B
27 39Right-handed alpha
Helix 18
AB9
B
96 108Right-handed alpha
Helix 19
AC1
B
125 141Right-handed alpha
Helix 20
AC2
B
141 146Right-handed alpha
Helix 21
AC3
B
158 175Right-handed alpha
Helix 22
AC4
B
195 201Right-handed alpha
Helix 23
AC5
B
208 220Right-handed alpha
Helix 24
AC6
B
232 236Right-handed 310
Helix 25
AC7
B
237 242Right-handed alpha
Helix 26
AC8
B
257 271Right-handed alpha
Helix 27
AC9
B
290 294Right-handed 310
Helix 28
AD1
B
296 316Right-handed alpha
Helix 29
AD2
C
5 15Right-handed alpha
Helix 30
AD3
C
22 26Right-handed 310
Helix 31
AD4
C
27 39Right-handed alpha
Helix 32
AD5
C
96 108Right-handed alpha
Helix 33
AD6
C
125 141Right-handed alpha
Helix 34
AD7
C
141 146Right-handed alpha
Helix 35
AD8
C
158 175Right-handed alpha
Helix 36
AD9
C
195 201Right-handed alpha
Helix 37
AE1
C
208 220Right-handed alpha
Helix 38
AE2
C
232 236Right-handed 310
Helix 39
AE3
C
237 242Right-handed alpha
Helix 40
AE4
C
257 271Right-handed alpha
Helix 41
AE5
C
290 294Right-handed 310
Helix 42
AE6
C
296 316Right-handed alpha
Helix 43
AE7
D
5 19Right-handed alpha
Helix 44
AE8
D
22 26Right-handed 310
Helix 45
AE9
D
27 39Right-handed alpha
Helix 46
AF1
D
96 108Right-handed alpha
Helix 47
AF2
D
125 141Right-handed alpha
Helix 48
AF3
D
141 146Right-handed alpha
Helix 49
AF4
D
158 175Right-handed alpha
Helix 50
AF5
D
195 201Right-handed alpha
Helix 51
AF6
D
208 220Right-handed alpha
Helix 52
AF7
D
232 236Right-handed 310
Helix 53
AF8
D
237 242Right-handed alpha
Helix 54
AF9
D
257 271Right-handed alpha
Helix 55
AG1
D
290 294Right-handed 310
Helix 56
AG2
D
296 316Right-handed alpha
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There are 3 sheets in PDB entry 7ZJO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 55first strand
Strand 2
A
63 70anti-parallel
Strand 3
A
110 115anti-parallel
Strand 4
A
77 83parallel
Strand 5
A
147 157parallel
Strand 6
A
181 185parallel
Strand 7
A
247 254parallel
Strand 8
A
275 284parallel
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There are 16 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 55first strand
Strand 2
B
63 70anti-parallel
Strand 3
B
110 115anti-parallel
Strand 4
B
77 83parallel
Strand 5
B
147 157parallel
Strand 6
B
181 185parallel
Strand 7
B
247 254parallel
Strand 8
B
275 284parallel
Strand 9
D
275 284anti-parallel
Strand 10
D
247 254parallel
Strand 11
D
181 185parallel
Strand 12
D
147 157parallel
Strand 13
D
77 83parallel
Strand 14
D
110 115parallel
Strand 15
D
63 70anti-parallel
Strand 16
D
48 55anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 55first strand
Strand 2
C
63 70anti-parallel
Strand 3
C
110 115anti-parallel
Strand 4
C
77 83parallel
Strand 5
C
147 157parallel
Strand 6
C
181 185parallel
Strand 7
C
247 254parallel
Strand 8
C
275 284parallel
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