Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZJP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZJP entry

There are 2 chains in PDB entry 7ZJP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 207ASP 426
B
 ARG 209ASP 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7ZJP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
260 266Right-handed 310
Helix 2
AA2
A
272 280Right-handed alpha
Helix 3
AA3
A
281 283Right-handed 310
Helix 4
AA4
A
359 372Right-handed alpha
Helix 5
AA5
A
374 383Right-handed alpha
Helix 6
AA6
B
260 266Right-handed 310
Helix 7
AA7
B
272 280Right-handed alpha
Helix 8
AA8
B
281 283Right-handed 310
Helix 9
AA9
B
359 371Right-handed alpha
Helix 10
AB1
B
374 384Right-handed alpha
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There are 7 sheets in PDB entry 7ZJP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 212first strand
Strand 2
A
217 230anti-parallel
Strand 3
A
233 241anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 212first strand
Strand 2
A
217 230anti-parallel
Strand 3
A
304 314anti-parallel
Strand 4
A
348 357anti-parallel
Strand 5
A
343 345anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 258first strand
Strand 2
A
417 424parallel
Strand 3
A
285 292anti-parallel
Strand 4
A
399 409parallel
Strand 5
A
385 393anti-parallel
Strand 6
A
319 328anti-parallel
Strand 7
A
331 341anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 213first strand
Strand 2
B
216 230anti-parallel
Strand 3
B
233 241anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 213first strand
Strand 2
B
216 230anti-parallel
Strand 3
B
304 314anti-parallel
Strand 4
B
348 357anti-parallel
Strand 5
B
343 345anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 247first strand
Strand 2
B
417 424parallel
Strand 3
B
253 258parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 247first strand
Strand 2
B
417 424parallel
Strand 3
B
285 292anti-parallel
Strand 4
B
399 409parallel
Strand 5
B
385 393anti-parallel
Strand 6
B
319 328anti-parallel
Strand 7
B
331 341anti-parallel
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