Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZJU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZJU entry

There are 4 chains in PDB entry 7ZJU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 225	ILE 501
B	HIS 16	GLY 91
C	LEU 225	LYS 500
D	HIS 16	GLY 91

There are 24 helices in PDB entry 7ZJU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	235	247	Right-handed alpha
Helix 2	AA2	A	248	256	Right-handed alpha
Helix 3	AA3	A	264	278	Right-handed alpha
Helix 4	AA4	A	302	324	Right-handed alpha
Helix 5	AA5	A	332	342	Right-handed alpha
Helix 6	AA6	A	344	349	Right-handed alpha
Helix 7	AA7	A	387	390	Right-handed 310
Helix 8	AA8	A	430	435	Right-handed 310
Helix 9	AA9	A	472	476	Right-handed 310
Helix 10	AB1	A	488	490	Right-handed 310
Helix 11	AB2	B	39	51	Right-handed alpha
Helix 12	AB3	B	53	55	Right-handed 310
Helix 13	AB4	C	235	247	Right-handed alpha
Helix 14	AB5	C	248	256	Right-handed alpha
Helix 15	AB6	C	264	283	Right-handed alpha
Helix 16	AB7	C	300	324	Right-handed alpha
Helix 17	AB8	C	332	343	Right-handed alpha
Helix 18	AB9	C	344	349	Right-handed alpha
Helix 19	AC1	C	430	435	Right-handed 310
Helix 20	AC2	C	453	455	Right-handed 310
Helix 21	AC3	C	488	490	Right-handed 310
Helix 22	AC4	D	39	51	Right-handed alpha
Helix 23	AC5	D	53	55	Right-handed 310
Helix 24	AC6	D	71	76	Right-handed alpha

There are 8 sheets in PDB entry 7ZJU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	374	first strand
Strand 2	A	353	360	anti-parallel
Strand 3	A	405	413	anti-parallel
Strand 4	A	391	395	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	379	first strand
Strand 2	A	417	422	parallel
Strand 3	A	492	499	anti-parallel
Strand 4	A	441	452	anti-parallel
Strand 5	A	436	438	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	379	first strand
Strand 2	A	417	422	parallel
Strand 3	A	492	499	anti-parallel
Strand 4	A	441	452	anti-parallel
Strand 5	A	456	462	anti-parallel
Strand 6	A	468	471	anti-parallel
Strand 7	A	480	482	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	33	first strand
Strand 2	B	17	23	anti-parallel
Strand 3	B	81	87	parallel
Strand 4	B	57	61	anti-parallel
Strand 5	B	64	65	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	367	374	first strand
Strand 2	C	353	360	anti-parallel
Strand 3	C	405	413	anti-parallel
Strand 4	C	391	395	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	377	379	first strand
Strand 2	C	417	422	parallel
Strand 3	C	492	499	anti-parallel
Strand 4	C	441	452	anti-parallel
Strand 5	C	436	438	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	377	379	first strand
Strand 2	C	417	422	parallel
Strand 3	C	492	499	anti-parallel
Strand 4	C	441	452	anti-parallel
Strand 5	C	456	462	anti-parallel
Strand 6	C	468	471	anti-parallel
Strand 7	C	480	482	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	33	first strand
Strand 2	D	17	23	anti-parallel
Strand 3	D	82	87	parallel
Strand 4	D	57	61	anti-parallel
Strand 5	D	64	65	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZJU

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZJU