Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZJV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZJV entry

There are 2 chains in PDB entry 7ZJV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 225LYS 500
B
 MET 16GLY 91
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7ZJV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
235 247Right-handed alpha
Helix 2
AA2
A
248 258Right-handed alpha
Helix 3
AA3
A
264 282Right-handed alpha
Helix 4
AA4
A
298 324Right-handed alpha
Helix 5
AA5
A
332 342Right-handed alpha
Helix 6
AA6
A
344 349Right-handed alpha
Helix 7
AA7
A
387 390Right-handed 310
Helix 8
AA8
A
430 435Right-handed 310
Helix 9
AA9
A
472 476Right-handed 310
Helix 10
AB1
A
488 490Right-handed 310
Helix 11
AB2
B
39 51Right-handed alpha
Helix 12
AB3
B
53 55Right-handed 310
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There are 4 sheets in PDB entry 7ZJV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 374first strand
Strand 2
A
353 360anti-parallel
Strand 3
A
405 413anti-parallel
Strand 4
A
391 395anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 379first strand
Strand 2
A
418 422parallel
Strand 3
A
492 498anti-parallel
Strand 4
A
441 452anti-parallel
Strand 5
A
436 438anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 379first strand
Strand 2
A
418 422parallel
Strand 3
A
492 498anti-parallel
Strand 4
A
441 452anti-parallel
Strand 5
A
456 462anti-parallel
Strand 6
A
468 471anti-parallel
Strand 7
A
480 482anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 33first strand
Strand 2
B
17 23anti-parallel
Strand 3
B
81 87parallel
Strand 4
B
57 61anti-parallel
Strand 5
B
64 65anti-parallel
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