Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZK9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZK9 entry

There is 1 chain in PDB entry 7ZK9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 32LYS 1260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 7ZK9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 82Right-handed alpha
Helix 2
AA2
A
87 90Right-handed 310
Helix 3
AA3
A
91 154Right-handed alpha
Helix 4
AA4
A
155 161Right-handed alpha
Helix 5
AA5
A
164 207Right-handed alpha
Helix 6
AA6
A
209 256Right-handed alpha
Helix 7
AA7
A
256 264Right-handed alpha
Helix 8
AA8
A
270 319Right-handed alpha
Helix 9
AA9
A
323 365Right-handed alpha
Helix 10
AB1
A
430 437Right-handed alpha
Helix 11
AB2
A
458 465Right-handed alpha
Helix 12
AB3
A
479 488Right-handed alpha
Helix 13
AB4
A
492 500Right-handed alpha
Helix 14
AB5
A
528 544Right-handed alpha
Helix 15
AB6
A
564 576Right-handed alpha
Helix 16
AB7
A
585 591Right-handed alpha
Helix 17
AB8
A
695 700Right-handed alpha
Helix 18
AB9
A
704 719Right-handed alpha
Helix 19
AC1
A
719 736Right-handed alpha
Helix 20
AC2
A
743 795Right-handed alpha
Helix 21
AC3
A
796 802Right-handed alpha
Helix 22
AC4
A
806 817Right-handed alpha
Helix 23
AC5
A
818 850Right-handed alpha
Helix 24
AC6
A
852 886Right-handed alpha
Helix 25
AC7
A
886 899Right-handed alpha
Helix 26
AC8
A
899 906Right-handed alpha
Helix 27
AC9
A
909 962Right-handed alpha
Helix 28
AD1
A
966 991Right-handed alpha
Helix 29
AD2
A
997 1010Right-handed alpha
Helix 30
AD3
A
1068 1080Right-handed alpha
Helix 31
AD4
A
1101 1108Right-handed alpha
Helix 32
AD5
A
1122 1128Right-handed alpha
Helix 33
AD6
A
1129 1132Right-handed 310
Helix 34
AD7
A
1139 1149Right-handed alpha
Helix 35
AD8
A
1150 1157Right-handed alpha
Helix 36
AD9
A
1159 1163Right-handed 310
Helix 37
AE1
A
1173 1188Right-handed alpha
Helix 38
AE2
A
1205 1221Right-handed alpha
Helix 39
AE3
A
1229 1236Right-handed alpha
Helix 40
AE4
A
1250 1255Right-handed alpha
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There are 6 sheets in PDB entry 7ZK9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 391first strand
Strand 2
A
446 448anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 395first strand
Strand 2
A
406 407anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 467first strand
Strand 2
A
547 551parallel
Strand 3
A
577 581parallel
Strand 4
A
419 421parallel
Strand 5
A
593 594parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1031 1032first strand
Strand 2
A
1055 1056anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1061 1064first strand
Strand 2
A
1223 1226parallel
Strand 3
A
1193 1195parallel
Strand 4
A
1110 1112parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1091 1092first strand
Strand 2
A
1095 1096anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il