Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZKA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZKA entry

There is 1 chain in PDB entry 7ZKA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 34ALA 1271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 49 helices in PDB entry 7ZKA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 40Right-handed 310
Helix 2
AA2
A
43 72Right-handed alpha
Helix 3
AA3
A
81 85Right-handed 310
Helix 4
AA4
A
94 154Right-handed alpha
Helix 5
AA5
A
155 162Right-handed alpha
Helix 6
AA6
A
164 180Right-handed alpha
Helix 7
AA7
A
183 216Right-handed alpha
Helix 8
AA8
A
217 256Right-handed alpha
Helix 9
AA9
A
256 264Right-handed alpha
Helix 10
AB1
A
265 319Right-handed alpha
Helix 11
AB2
A
323 366Right-handed alpha
Helix 12
AB3
A
428 437Right-handed alpha
Helix 13
AB4
A
455 457Right-handed 310
Helix 14
AB5
A
458 465Right-handed alpha
Helix 15
AB6
A
479 486Right-handed alpha
Helix 16
AB7
A
492 503Right-handed alpha
Helix 17
AB8
A
505 512Right-handed alpha
Helix 18
AB9
A
514 518Right-handed 310
Helix 19
AC1
A
521 525Right-handed 310
Helix 20
AC2
A
528 542Right-handed alpha
Helix 21
AC3
A
558 572Right-handed alpha
Helix 22
AC4
A
584 590Right-handed alpha
Helix 23
AC5
A
607 614Right-handed alpha
Helix 24
AC6
A
616 624Right-handed alpha
Helix 25
AC7
A
691 699Right-handed alpha
Helix 26
AC8
A
700 702Right-handed 310
Helix 27
AC9
A
703 737Right-handed alpha
Helix 28
AD1
A
742 747Right-handed alpha
Helix 29
AD2
A
749 795Right-handed alpha
Helix 30
AD3
A
796 802Right-handed alpha
Helix 31
AD4
A
806 824Right-handed alpha
Helix 32
AD5
A
828 850Right-handed alpha
Helix 33
AD6
A
853 899Right-handed alpha
Helix 34
AD7
A
899 907Right-handed alpha
Helix 35
AD8
A
908 962Right-handed alpha
Helix 36
AD9
A
969 1010Right-handed alpha
Helix 37
AE1
A
1071 1080Right-handed alpha
Helix 38
AE2
A
1098 1100Right-handed 310
Helix 39
AE3
A
1101 1108Right-handed alpha
Helix 40
AE4
A
1122 1129Right-handed alpha
Helix 41
AE5
A
1137 1148Right-handed alpha
Helix 42
AE6
A
1150 1157Right-handed alpha
Helix 43
AE7
A
1159 1163Right-handed 310
Helix 44
AE8
A
1166 1170Right-handed 310
Helix 45
AE9
A
1173 1188Right-handed alpha
Helix 46
AF1
A
1203 1217Right-handed alpha
Helix 47
AF2
A
1229 1236Right-handed alpha
Helix 48
AF3
A
1252 1259Right-handed alpha
Helix 49
AF4
A
1261 1271Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 7ZKA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 412first strand
Strand 2
A
388 395anti-parallel
Strand 3
A
444 449anti-parallel
Strand 4
A
452 453anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 469first strand
Strand 2
A
547 551parallel
Strand 3
A
577 581parallel
Strand 4
A
418 422parallel
Strand 5
A
593 598parallel
Strand 6
A
601 606anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1050 1056first strand
Strand 2
A
1031 1037anti-parallel
Strand 3
A
1087 1092anti-parallel
Strand 4
A
1095 1096anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1109 1112first strand
Strand 2
A
1192 1196parallel
Strand 3
A
1222 1226parallel
Strand 4
A
1061 1066parallel
Strand 5
A
1238 1243parallel
Strand 6
A
1246 1251anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il