Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZKE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZKE entry

There are 4 chains in PDB entry 7ZKE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 G 3 C 12
B
 G 25 C 34
D
 SER 76ARG 253
E
 ALA 2GLN 1886
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are104 helices in PDB entry 7ZKE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
96 104Right-handed alpha
Helix 2
AA2
D
143 161Right-handed alpha
Helix 3
AA3
D
186 194Right-handed alpha
Helix 4
AA4
D
234 250Right-handed alpha
Helix 5
AA5
E
3 14Right-handed alpha
Helix 6
AA6
E
17 35Right-handed alpha
Helix 7
AA7
E
38 47Right-handed alpha
Helix 8
AA8
E
48 52Right-handed 310
Helix 9
AA9
E
54 72Right-handed alpha
Helix 10
AB1
E
111 115Right-handed 310
Helix 11
AB2
E
116 123Right-handed alpha
Helix 12
AB3
E
134 139Right-handed alpha
Helix 13
AB4
E
141 157Right-handed alpha
Helix 14
AB5
E
165 169Right-handed 310
Helix 15
AB6
E
313 324Right-handed alpha
Helix 16
AB7
E
328 347Right-handed alpha
Helix 17
AB8
E
348 350Right-handed 310
Helix 18
AB9
E
357 383Right-handed alpha
Helix 19
AC1
E
395 412Right-handed alpha
Helix 20
AC2
E
413 430Right-handed alpha
Helix 21
AC3
E
438 457Right-handed alpha
Helix 22
AC4
E
457 462Right-handed alpha
Helix 23
AC5
E
464 480Right-handed alpha
Helix 24
AC6
E
483 495Right-handed alpha
Helix 25
AC7
E
497 502Right-handed alpha
Helix 26
AC8
E
505 522Right-handed alpha
Helix 27
AC9
E
530 542Right-handed alpha
Helix 28
AD1
E
544 556Right-handed alpha
Helix 29
AD2
E
558 561Right-handed 310
Helix 30
AD3
E
562 567Right-handed alpha
Helix 31
AD4
E
568 574Right-handed 310
Helix 32
AD5
E
578 594Right-handed alpha
Helix 33
AD6
E
596 601Right-handed alpha
Helix 34
AD7
E
605 618Right-handed alpha
Helix 35
AD8
E
621 643Right-handed alpha
Helix 36
AD9
E
643 653Right-handed alpha
Helix 37
AE1
E
654 663Right-handed alpha
Helix 38
AE2
E
676 680Right-handed 310
Helix 39
AE3
E
744 766Right-handed alpha
Helix 40
AE4
E
767 770Right-handed 310
Helix 41
AE5
E
771 783Right-handed alpha
Helix 42
AE6
E
786 804Right-handed alpha
Helix 43
AE7
E
806 811Right-handed alpha
Helix 44
AE8
E
813 823Right-handed alpha
Helix 45
AE9
E
829 831Right-handed 310
Helix 46
AF1
E
832 853Right-handed alpha
Helix 47
AF2
E
880 890Right-handed alpha
Helix 48
AF3
E
890 899Right-handed alpha
Helix 49
AF4
E
903 947Right-handed alpha
Helix 50
AF5
E
954 968Right-handed alpha
Helix 51
AF6
E
970 992Right-handed alpha
Helix 52
AF7
E
993 1009Right-handed alpha
Helix 53
AF8
E
1017 1022Right-handed alpha
Helix 54
AF9
E
1028 1033Right-handed alpha
Helix 55
AG1
E
1044 1072Right-handed alpha
Helix 56
AG2
E
1074 1079Right-handed alpha
Helix 57
AG3
E
1079 1095Right-handed alpha
Helix 58
AG4
E
1099 1104Right-handed 310
Helix 59
AG5
E
1108 1124Right-handed alpha
Helix 60
AG6
E
1128 1130Right-handed 310
Helix 61
AG7
E
1131 1147Right-handed alpha
Helix 62
AG8
E
1150 1168Right-handed alpha
Helix 63
AG9
E
1168 1180Right-handed alpha
Helix 64
AH1
E
1181 1184Right-handed 310
Helix 65
AH2
E
1189 1208Right-handed alpha
Helix 66
AH3
E
1211 1213Right-handed 310
Helix 67
AH4
E
1214 1224Right-handed alpha
Helix 68
AH5
E
1230 1245Right-handed alpha
Helix 69
AH6
E
1246 1251Right-handed 310
Helix 70
AH7
E
1261 1280Right-handed alpha
Helix 71
AH8
E
1281 1284Right-handed 310
Helix 72
AH9
E
1298 1315Right-handed alpha
Helix 73
AI1
E
1327 1351Right-handed alpha
Helix 74
AI2
E
1352 1356Right-handed 310
Helix 75
AI3
E
1365 1367Right-handed 310
Helix 76
AI4
E
1368 1380Right-handed alpha
Helix 77
AI5
E
1391 1398Right-handed alpha
Helix 78
AI6
E
1400 1405Right-handed 310
Helix 79
AI7
E
1412 1418Right-handed alpha
Helix 80
AI8
E
1418 1423Right-handed alpha
Helix 81
AI9
E
1435 1439Right-handed 310
Helix 82
AJ1
E
1443 1450Right-handed alpha
Helix 83
AJ2
E
1468 1471Right-handed 310
Helix 84
AJ3
E
1472 1480Right-handed alpha
Helix 85
AJ4
E
1486 1494Right-handed alpha
Helix 86
AJ5
E
1494 1503Right-handed alpha
Helix 87
AJ6
E
1507 1526Right-handed alpha
Helix 88
AJ7
E
1533 1538Right-handed alpha
Helix 89
AJ8
E
1554 1568Right-handed alpha
Helix 90
AJ9
E
1568 1576Right-handed alpha
Helix 91
AK1
E
1580 1600Right-handed alpha
Helix 92
AK2
E
1600 1605Right-handed alpha
Helix 93
AK3
E
1611 1623Right-handed alpha
Helix 94
AK4
E
1628 1631Right-handed 310
Helix 95
AK5
E
1632 1645Right-handed alpha
Helix 96
AK6
E
1673 1687Right-handed alpha
Helix 97
AK7
E
1702 1716Right-handed alpha
Helix 98
AK8
E
1726 1730Right-handed alpha
Helix 99
AK9
E
1749 1759Right-handed alpha
Helix 100
AL1
E
1778 1785Right-handed 310
Helix 101
AL2
E
1786 1791Right-handed alpha
Helix 102
AL3
E
1856 1860Right-handed 310
Helix 103
AL4
E
1869 1876Right-handed alpha
Helix 104
AL5
E
1877 1884Right-handed alpha
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There are 4 sheets in PDB entry 7ZKE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
117 121first strand
Strand 2
D
126 130anti-parallel
Strand 3
D
135 141anti-parallel
Strand 4
D
81 90anti-parallel
Strand 5
D
171 180anti-parallel
Strand 6
D
226 232anti-parallel
Strand 7
D
218 221anti-parallel
Strand 8
D
208 211anti-parallel
Strand 9
D
198 199anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
667 668first strand
Strand 2
E
671 672anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1385 1388first strand
Strand 2
E
1407 1411parallel
Strand 3
E
1360 1364parallel
Strand 4
E
1429 1433parallel
Strand 5
E
1456 1460parallel
Strand 6
E
1318 1320parallel
Strand 7
E
1529 1530parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1544 1551first strand
Strand 2
E
1769 1776parallel
Strand 3
E
1740 1743parallel
Strand 4
E
1667 1671parallel
Strand 5
E
1721 1725parallel
Strand 6
E
1694 1697parallel
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