Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZKP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZKP entry

There are 14 chains in PDB entry 7ZKP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ALA 2ILE 87
L
 PHE 2ILE 89
U
 PRO 2LEU 172
W
 LEU 31PRO 122
X
 SER 4GLU 167
1
 ILE 2LEU 340
2
 LEU 2ASN 469
3
 ASN 2LYS 115
6
 MET 2LYS 184
g
 ILE 2ASP 77
b
 ALA 2LYS 65
9
 THR 2VAL 87
C
 ILE 508GLY 844
A
 ARG 7PRO 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are107 helices in PDB entry 7ZKP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
4 34Right-handed alpha
Helix 2
AA2
D
43 58Right-handed alpha
Helix 3
AA3
D
71 76Right-handed 310
Helix 4
AA4
L
2 19Right-handed alpha
Helix 5
AA5
L
21 48Right-handed alpha
Helix 6
AA6
L
49 79Right-handed alpha
Helix 7
AA7
U
31 61Right-handed alpha
Helix 8
AA8
U
63 68Right-handed alpha
Helix 9
AA9
U
68 90Right-handed alpha
Helix 10
AB1
U
90 104Right-handed alpha
Helix 11
AB2
U
107 110Right-handed 310
Helix 12
AB3
U
111 126Right-handed alpha
Helix 13
AB4
U
141 145Right-handed 310
Helix 14
AB5
U
156 170Right-handed alpha
Helix 15
AB6
W
32 96Right-handed alpha
Helix 16
AB7
X
27 34Right-handed alpha
Helix 17
AB8
X
36 61Right-handed alpha
Helix 18
AB9
X
71 99Right-handed alpha
Helix 19
AC1
X
104 122Right-handed alpha
Helix 20
AC2
X
132 144Right-handed alpha
Helix 21
AC3
X
145 150Right-handed 310
Helix 22
AC4
1
2 34Right-handed alpha
Helix 23
AC5
1
45 58Right-handed alpha
Helix 24
AC6
1
70 87Right-handed alpha
Helix 25
AC7
1
104 116Right-handed alpha
Helix 26
AC8
1
117 127Right-handed alpha
Helix 27
AC9
1
129 159Right-handed alpha
Helix 28
AD1
1
165 173Right-handed alpha
Helix 29
AD2
1
182 197Right-handed alpha
Helix 30
AD3
1
223 246Right-handed alpha
Helix 31
AD4
1
255 263Right-handed alpha
Helix 32
AD5
1
267 298Right-handed alpha
Helix 33
AD6
1
304 315Right-handed alpha
Helix 34
AD7
1
315 334Right-handed alpha
Helix 35
AD8
2
2 15Right-handed alpha
Helix 36
AD9
2
17 19Right-handed 310
Helix 37
AE1
2
20 39Right-handed alpha
Helix 38
AE2
2
40 50Right-handed 310
Helix 39
AE3
2
62 85Right-handed alpha
Helix 40
AE4
2
90 97Right-handed alpha
Helix 41
AE5
2
102 119Right-handed alpha
Helix 42
AE6
2
122 143Right-handed alpha
Helix 43
AE7
2
147 180Right-handed alpha
Helix 44
AE8
2
183 187Right-handed 310
Helix 45
AE9
2
188 195Right-handed alpha
Helix 46
AF1
2
197 213Right-handed alpha
Helix 47
AF2
2
218 228Right-handed alpha
Helix 48
AF3
2
229 237Right-handed alpha
Helix 49
AF4
2
238 252Right-handed alpha
Helix 50
AF5
2
257 277Right-handed alpha
Helix 51
AF6
2
280 298Right-handed alpha
Helix 52
AF7
2
299 302Right-handed 310
Helix 53
AF8
2
305 330Right-handed alpha
Helix 54
AF9
2
331 334Right-handed 310
Helix 55
AG1
2
346 351Right-handed 310
Helix 56
AG2
2
352 356Right-handed 310
Helix 57
AG3
2
357 373Right-handed alpha
Helix 58
AG4
2
377 393Right-handed alpha
Helix 59
AG5
2
395 421Right-handed alpha
Helix 60
AG6
2
436 453Right-handed alpha
Helix 61
AG7
2
456 468Right-handed alpha
Helix 62
AG8
3
3 25Right-handed alpha
Helix 63
AG9
3
53 72Right-handed alpha
Helix 64
AH1
3
73 79Right-handed alpha
Helix 65
AH2
3
83 108Right-handed alpha
Helix 66
AH3
6
2 7Right-handed alpha
Helix 67
AH4
6
7 25Right-handed alpha
Helix 68
AH5
6
28 51Right-handed alpha
Helix 69
AH6
6
52 66Right-handed alpha
Helix 70
AH7
6
66 81Right-handed alpha
Helix 71
AH8
6
89 92Right-handed 310
Helix 72
AH9
6
93 110Right-handed alpha
Helix 73
AI1
6
111 117Right-handed 310
Helix 74
AI2
6
118 128Right-handed alpha
Helix 75
AI3
6
145 156Right-handed alpha
Helix 76
AI4
6
158 181Right-handed alpha
Helix 77
AI5
g
11 23Right-handed alpha
Helix 78
AI6
g
23 51Right-handed alpha
Helix 79
AI7
b
3 25Right-handed alpha
Helix 80
AI8
b
32 64Right-handed alpha
Helix 81
AI9
9
15 29Right-handed alpha
Helix 82
AJ1
9
31 36Right-handed 310
Helix 83
AJ2
9
37 50Right-handed alpha
Helix 84
AJ3
9
50 66Right-handed alpha
Helix 85
AJ4
9
80 84Right-handed 310
Helix 86
AJ5
C
509 522Right-handed alpha
Helix 87
AJ6
C
526 538Right-handed alpha
Helix 88
AJ7
C
540 544Right-handed 310
Helix 89
AJ8
C
555 565Right-handed alpha
Helix 90
AJ9
C
573 586Right-handed alpha
Helix 91
AK1
C
591 600Right-handed alpha
Helix 92
AK2
C
607 623Right-handed alpha
Helix 93
AK3
C
630 642Right-handed alpha
Helix 94
AK4
C
646 659Right-handed alpha
Helix 95
AK5
C
666 680Right-handed alpha
Helix 96
AK6
C
682 695Right-handed alpha
Helix 97
AK7
C
703 714Right-handed alpha
Helix 98
AK8
C
717 732Right-handed alpha
Helix 99
AK9
C
736 750Right-handed alpha
Helix 100
AL1
C
752 767Right-handed alpha
Helix 101
AL2
C
772 782Right-handed alpha
Helix 102
AL3
C
787 800Right-handed alpha
Helix 103
AL4
C
800 809Right-handed alpha
Helix 104
AL5
C
826 842Right-handed alpha
Helix 105
AL6
A
25 28Right-handed 310
Helix 106
AL7
A
36 38Right-handed 310
Helix 107
AL8
A
152 154Right-handed 310
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There are 5 sheets in PDB entry 7ZKP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
6
132 134first strand
Strand 2
D
79 83anti-parallel
Strand 3
U
9 14anti-parallel
Strand 4
9
76 78anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
52 54first strand
Strand 2
2
59 61anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 19first strand
Strand 2
A
187 198anti-parallel
Strand 3
A
57 63anti-parallel
Strand 4
A
43 49anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 19first strand
Strand 2
A
187 198anti-parallel
Strand 3
A
105 111anti-parallel
Strand 4
A
144 150anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
81 85anti-parallel
Strand 3
A
173 180anti-parallel
Strand 4
A
117 123anti-parallel
Strand 5
A
130 135anti-parallel
Strand 6
A
155 158anti-parallel
Strand 7
A
161 162anti-parallel
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