Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZLJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZLJ entry

There are 5 chains in PDB entry 7ZLJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	GLU 4	LYS 229
K	GLN 1	SER 120
L	ASP 2	ARG 212
A	TYR 23	LEU 684
P	GLY -2	SER 4

There are 40 helices in PDB entry 7ZLJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	H	65	68	Right-handed 310
Helix 2	AA2	H	171	173	Right-handed 310
Helix 3	AA3	H	202	207	Right-handed 310
Helix 4	AA4	K	62	65	Right-handed 310
Helix 5	AA5	L	122	127	Right-handed 310
Helix 6	AA6	L	184	188	Right-handed alpha
Helix 7	AA7	A	25	55	Right-handed alpha
Helix 8	AA8	A	56	59	Right-handed 310
Helix 9	AA9	A	60	68	Right-handed alpha
Helix 10	AB1	A	69	85	Right-handed alpha
Helix 11	AB2	A	87	96	Right-handed alpha
Helix 12	AB3	A	109	114	Right-handed alpha
Helix 13	AB4	A	115	136	Right-handed alpha
Helix 14	AB5	A	161	175	Right-handed alpha
Helix 15	AB6	A	176	190	Right-handed alpha
Helix 16	AB7	A	191	205	Right-handed alpha
Helix 17	AB8	A	219	241	Right-handed alpha
Helix 18	AB9	A	244	261	Right-handed alpha
Helix 19	AC1	A	264	281	Right-handed alpha
Helix 20	AC2	A	286	308	Right-handed alpha
Helix 21	AC3	A	311	315	Right-handed 310
Helix 22	AC4	A	319	333	Right-handed alpha
Helix 23	AC5	A	334	337	Right-handed 310
Helix 24	AC6	A	341	369	Right-handed alpha
Helix 25	AC7	A	374	385	Right-handed alpha
Helix 26	AC8	A	390	397	Right-handed alpha
Helix 27	AC9	A	405	415	Right-handed alpha
Helix 28	AD1	A	416	435	Right-handed alpha
Helix 29	AD2	A	449	469	Right-handed alpha
Helix 30	AD3	A	472	484	Right-handed alpha
Helix 31	AD4	A	485	489	Right-handed 310
Helix 32	AD5	A	500	517	Right-handed alpha
Helix 33	AD6	A	518	528	Right-handed alpha
Helix 34	AD7	A	534	548	Right-handed alpha
Helix 35	AD8	A	557	567	Right-handed alpha
Helix 36	AD9	A	583	591	Right-handed alpha
Helix 37	AE1	A	592	595	Right-handed 310
Helix 38	AE2	A	598	610	Right-handed alpha
Helix 39	AE3	A	631	639	Right-handed alpha
Helix 40	AE4	A	648	660	Right-handed alpha

There are 14 sheets in PDB entry 7ZLJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6	10	first strand
Strand 2	H	20	28	anti-parallel
Strand 3	H	81	87	anti-parallel
Strand 4	H	71	76	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	13	15	first strand
Strand 2	H	122	126	parallel
Strand 3	H	95	103	anti-parallel
Strand 4	H	35	42	anti-parallel
Strand 5	H	48	55	anti-parallel
Strand 6	H	60	63	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	139	first strand
Strand 2	H	153	158	anti-parallel
Strand 3	H	191	197	anti-parallel
Strand 4	H	178	180	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	139	first strand
Strand 2	H	153	158	anti-parallel
Strand 3	H	191	197	anti-parallel
Strand 4	H	184	185	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	166	169	first strand
Strand 2	H	210	214	anti-parallel
Strand 3	H	223	225	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	3	6	first strand
Strand 2	K	17	25	anti-parallel
Strand 3	K	78	84	anti-parallel
Strand 4	K	68	73	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	58	60	first strand
Strand 2	K	46	51	anti-parallel
Strand 3	K	34	39	anti-parallel
Strand 4	K	92	98	anti-parallel
Strand 5	K	115	117	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	5	7	first strand
Strand 2	L	20	26	anti-parallel
Strand 3	L	71	76	anti-parallel
Strand 4	L	63	68	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	13	first strand
Strand 2	L	103	106	parallel
Strand 3	L	86	91	anti-parallel
Strand 4	L	34	39	anti-parallel
Strand 5	L	46	50	anti-parallel
Strand 6	L	54	55	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	115	119	first strand
Strand 2	L	130	138	anti-parallel
Strand 3	L	175	183	anti-parallel
Strand 4	L	160	164	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	150	151	first strand
Strand 2	L	154	155	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	193	197	first strand
Strand 2	L	206	210	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	145	first strand
Strand 2	A	153	157	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	554	556	first strand
Strand 2	A	613	617	parallel
Strand 3	A	678	683	anti-parallel
Strand 4	A	668	674	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZLJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZLJ