Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZM6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZM6 entry

There are 2 chains in PDB entry 7ZM6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 198	ASN 626
B	ALA 194	ASN 626

There are 8 helices in PDB entry 7ZM6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	327	334	Right-handed alpha
Helix 2	AA2	A	357	361	Right-handed 310
Helix 3	AA3	A	411	419	Right-handed alpha
Helix 4	AA4	B	268	271	Right-handed 310
Helix 5	AA5	B	327	334	Right-handed alpha
Helix 6	AA6	B	357	361	Right-handed 310
Helix 7	AA7	B	411	419	Right-handed alpha
Helix 8	AA8	B	452	456	Right-handed 310

There are 14 sheets in PDB entry 7ZM6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	206	first strand
Strand 2	A	577	588	anti-parallel
Strand 3	A	595	605	anti-parallel
Strand 4	A	613	622	anti-parallel
Strand 5	A	226	227	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	251	first strand
Strand 2	A	254	263	anti-parallel
Strand 3	A	273	283	anti-parallel
Strand 4	A	289	300	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	351	356	first strand
Strand 2	A	340	346	anti-parallel
Strand 3	A	316	324	anti-parallel
Strand 4	A	304	313	anti-parallel
Strand 5	A	375	376	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	369	372	first strand
Strand 2	A	383	393	anti-parallel
Strand 3	A	427	437	anti-parallel
Strand 4	A	420	422	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	378	380	first strand
Strand 2	A	383	393	anti-parallel
Strand 3	A	427	437	anti-parallel
Strand 4	A	447	450	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	462	466	first strand
Strand 2	A	473	477	anti-parallel
Strand 3	A	487	493	anti-parallel
Strand 4	A	497	502	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	532	535	first strand
Strand 2	A	542	549	anti-parallel
Strand 3	A	554	561	anti-parallel
Strand 4	A	564	570	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	205	206	first strand
Strand 2	B	577	587	anti-parallel
Strand 3	B	595	605	anti-parallel
Strand 4	B	613	622	anti-parallel
Strand 5	B	226	227	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	251	first strand
Strand 2	B	254	263	anti-parallel
Strand 3	B	273	283	anti-parallel
Strand 4	B	289	300	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	352	356	first strand
Strand 2	B	340	346	anti-parallel
Strand 3	B	316	324	anti-parallel
Strand 4	B	304	313	anti-parallel
Strand 5	B	375	376	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	362	363	first strand
Strand 2	B	447	450	parallel
Strand 3	B	427	437	anti-parallel
Strand 4	B	383	393	anti-parallel
Strand 5	B	378	380	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	369	372	first strand
Strand 2	B	383	393	anti-parallel
Strand 3	B	427	437	anti-parallel
Strand 4	B	420	422	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	462	466	first strand
Strand 2	B	473	477	anti-parallel
Strand 3	B	487	493	anti-parallel
Strand 4	B	497	502	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	532	535	first strand
Strand 2	B	542	549	anti-parallel
Strand 3	B	554	561	anti-parallel
Strand 4	B	564	570	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZM6

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZM6