Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZM8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZM8 entry

There are 26 chains in PDB entry 7ZM8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	MET 1	LEU 378
2	MET 1	ALA 571
3	MET 1	HIS 114
4	MET 1	THR 537
5	MET 1	GLU 670
6	SER 3	ARG 222
8	ARG 10	ASN 86
9	ALA 2	ALA 103
D	PRO 2	UNK 86
J	TYR 11	GLN 198
L	ASN 2	TYR 88
Q	GLU 57	HIS 141
R	SER 2	PHE 99
S	GLN 67	ASN 138
U	MET 1	GLN 167
W	PRO 21	GLU 121
X	THR 4	ALA 189
a	PHE 32	ASP 174
b	VAL 2	GLU 81
c	LYS 13	HIS 76
d	PRO 2	GLU 101
e	VAL 8	TRP 45
g	THR 4	GLU 80
i	PRO 5	GLN 85
j	GLY 3	ARG 75
n	GLY 44	ALA 178

There are212 helices in PDB entry 7ZM8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	1	4	39	Right-handed alpha
Helix 2	AA2	1	53	64	Right-handed alpha
Helix 3	AA3	1	76	92	Right-handed alpha
Helix 4	AA4	1	93	96	Right-handed 310
Helix 5	AA5	1	109	129	Right-handed alpha
Helix 6	AA6	1	134	167	Right-handed alpha
Helix 7	AA7	1	170	178	Right-handed alpha
Helix 8	AA8	1	187	202	Right-handed alpha
Helix 9	AA9	1	208	213	Right-handed alpha
Helix 10	AB1	1	214	217	Right-handed 310
Helix 11	AB2	1	230	251	Right-handed alpha
Helix 12	AB3	1	259	268	Right-handed alpha
Helix 13	AB4	1	294	304	Right-handed alpha
Helix 14	AB5	1	304	332	Right-handed alpha
Helix 15	AB6	1	338	349	Right-handed alpha
Helix 16	AB7	1	349	368	Right-handed alpha
Helix 17	AB8	2	2	15	Right-handed alpha
Helix 18	AB9	2	18	20	Right-handed 310
Helix 19	AC1	2	21	43	Right-handed alpha
Helix 20	AC2	2	61	80	Right-handed alpha
Helix 21	AC3	2	81	83	Right-handed 310
Helix 22	AC4	2	96	103	Right-handed alpha
Helix 23	AC5	2	109	114	Right-handed alpha
Helix 24	AC6	2	117	122	Right-handed 310
Helix 25	AC7	2	124	141	Right-handed alpha
Helix 26	AC8	2	144	165	Right-handed alpha
Helix 27	AC9	2	169	202	Right-handed alpha
Helix 28	AD1	2	205	217	Right-handed alpha
Helix 29	AD2	2	238	255	Right-handed alpha
Helix 30	AD3	2	262	271	Right-handed alpha
Helix 31	AD4	2	272	298	Right-handed alpha
Helix 32	AD5	2	306	310	Right-handed 310
Helix 33	AD6	2	311	329	Right-handed alpha
Helix 34	AD7	2	330	333	Right-handed 310
Helix 35	AD8	2	335	357	Right-handed alpha
Helix 36	AD9	2	359	389	Right-handed alpha
Helix 37	AE1	2	390	392	Right-handed 310
Helix 38	AE2	2	398	403	Right-handed alpha
Helix 39	AE3	2	414	419	Right-handed 310
Helix 40	AE4	2	420	425	Right-handed alpha
Helix 41	AE5	2	425	441	Right-handed alpha
Helix 42	AE6	2	445	462	Right-handed alpha
Helix 43	AE7	2	463	491	Right-handed alpha
Helix 44	AE8	2	526	528	Right-handed 310
Helix 45	AE9	2	533	549	Right-handed alpha
Helix 46	AF1	2	550	553	Right-handed 310
Helix 47	AF2	2	554	570	Right-handed alpha
Helix 48	AF3	3	2	26	Right-handed alpha
Helix 49	AF4	3	53	78	Right-handed alpha
Helix 50	AF5	3	79	108	Right-handed alpha
Helix 51	AF6	4	2	22	Right-handed alpha
Helix 52	AF7	4	23	25	Right-handed 310
Helix 53	AF8	4	71	97	Right-handed alpha
Helix 54	AF9	4	123	144	Right-handed alpha
Helix 55	AG1	4	151	172	Right-handed alpha
Helix 56	AG2	4	174	183	Right-handed alpha
Helix 57	AG3	4	185	197	Right-handed alpha
Helix 58	AG4	4	200	231	Right-handed alpha
Helix 59	AG5	4	234	241	Right-handed alpha
Helix 60	AG6	4	244	263	Right-handed alpha
Helix 61	AG7	4	265	268	Right-handed 310
Helix 62	AG8	4	269	279	Right-handed alpha
Helix 63	AG9	4	280	290	Right-handed alpha
Helix 64	AH1	4	293	303	Right-handed alpha
Helix 65	AH2	4	307	314	Right-handed alpha
Helix 66	AH3	4	314	334	Right-handed alpha
Helix 67	AH4	4	338	358	Right-handed alpha
Helix 68	AH5	4	362	390	Right-handed alpha
Helix 69	AH6	4	390	396	Right-handed alpha
Helix 70	AH7	4	399	403	Right-handed 310
Helix 71	AH8	4	405	409	Right-handed 310
Helix 72	AH9	4	410	425	Right-handed alpha
Helix 73	AI1	4	430	447	Right-handed alpha
Helix 74	AI2	4	447	455	Right-handed alpha
Helix 75	AI3	4	456	473	Right-handed alpha
Helix 76	AI4	4	490	510	Right-handed alpha
Helix 77	AI5	4	511	523	Right-handed alpha
Helix 78	AI6	4	524	526	Right-handed 310
Helix 79	AI7	5	2	19	Right-handed alpha
Helix 80	AI8	5	19	51	Right-handed alpha
Helix 81	AI9	5	79	104	Right-handed alpha
Helix 82	AJ1	5	109	130	Right-handed alpha
Helix 83	AJ2	5	132	152	Right-handed alpha
Helix 84	AJ3	5	157	190	Right-handed alpha
Helix 85	AJ4	5	193	201	Right-handed alpha
Helix 86	AJ5	5	202	204	Right-handed 310
Helix 87	AJ6	5	205	225	Right-handed alpha
Helix 88	AJ7	5	226	230	Right-handed 310
Helix 89	AJ8	5	231	236	Right-handed alpha
Helix 90	AJ9	5	237	239	Right-handed 310
Helix 91	AK1	5	240	247	Right-handed alpha
Helix 92	AK2	5	251	253	Right-handed 310
Helix 93	AK3	5	254	263	Right-handed alpha
Helix 94	AK4	5	263	268	Right-handed alpha
Helix 95	AK5	5	270	293	Right-handed alpha
Helix 96	AK6	5	297	319	Right-handed alpha
Helix 97	AK7	5	321	350	Right-handed alpha
Helix 98	AK8	5	355	359	Right-handed 310
Helix 99	AK9	5	366	381	Right-handed alpha
Helix 100	AL1	5	386	402	Right-handed alpha
Helix 101	AL2	5	404	434	Right-handed alpha
Helix 102	AL3	5	440	444	Right-handed 310
Helix 103	AL4	5	467	493	Right-handed alpha
Helix 104	AL5	5	508	512	Right-handed 310
Helix 105	AL6	5	513	520	Right-handed alpha
Helix 106	AL7	5	522	545	Right-handed alpha
Helix 107	AL8	5	548	556	Right-handed alpha
Helix 108	AL9	5	557	569	Right-handed alpha
Helix 109	AM1	5	572	581	Right-handed alpha
Helix 110	AM2	5	581	596	Right-handed alpha
Helix 111	AM3	5	599	604	Right-handed alpha
Helix 112	AM4	5	605	622	Right-handed alpha
Helix 113	AM5	5	627	646	Right-handed alpha
Helix 114	AM6	5	651	666	Right-handed alpha
Helix 115	AM7	6	20	40	Right-handed alpha
Helix 116	AM8	6	42	64	Right-handed alpha
Helix 117	AM9	6	66	78	Right-handed alpha
Helix 118	AN1	6	80	90	Right-handed alpha
Helix 119	AN2	6	95	100	Right-handed 310
Helix 120	AN3	6	106	125	Right-handed alpha
Helix 121	AN4	6	175	179	Right-handed 310
Helix 122	AN5	6	183	193	Right-handed alpha
Helix 123	AN6	6	196	219	Right-handed alpha
Helix 124	AN7	8	13	20	Right-handed alpha
Helix 125	AN8	8	23	27	Right-handed 310
Helix 126	AN9	8	28	29	Right-handed 310
Helix 127	AO1	8	30	45	Right-handed alpha
Helix 128	AO2	8	51	80	Right-handed alpha
Helix 129	AO3	9	14	29	Right-handed alpha
Helix 130	AO4	9	33	39	Right-handed 310
Helix 131	AO5	9	40	53	Right-handed alpha
Helix 132	AO6	9	53	72	Right-handed alpha
Helix 133	AO7	9	83	87	Right-handed 310
Helix 134	AO8	9	93	102	Right-handed alpha
Helix 135	AO9	D	4	33	Right-handed alpha
Helix 136	AP1	D	43	58	Right-handed alpha
Helix 137	AP2	J	15	42	Right-handed alpha
Helix 138	AP3	J	47	51	Right-handed 310
Helix 139	AP4	J	55	81	Right-handed alpha
Helix 140	AP5	J	86	104	Right-handed alpha
Helix 141	AP6	J	105	127	Right-handed alpha
Helix 142	AP7	J	139	150	Right-handed alpha
Helix 143	AP8	J	155	162	Right-handed alpha
Helix 144	AP9	J	172	186	Right-handed alpha
Helix 145	AQ1	L	3	17	Right-handed alpha
Helix 146	AQ2	L	22	47	Right-handed alpha
Helix 147	AQ3	L	50	82	Right-handed alpha
Helix 148	AQ4	Q	60	74	Right-handed alpha
Helix 149	AQ5	Q	99	113	Right-handed alpha
Helix 150	AQ6	Q	117	122	Right-handed alpha
Helix 151	AQ7	Q	126	136	Right-handed alpha
Helix 152	AQ8	R	4	22	Right-handed alpha
Helix 153	AQ9	R	24	41	Right-handed alpha
Helix 154	AR1	R	47	52	Right-handed alpha
Helix 155	AR2	R	52	65	Right-handed alpha
Helix 156	AR3	S	74	78	Right-handed 310
Helix 157	AR4	S	89	96	Right-handed alpha
Helix 158	AR5	S	96	111	Right-handed alpha
Helix 159	AR6	S	115	129	Right-handed alpha
Helix 160	AR7	U	32	39	Right-handed alpha
Helix 161	AR8	U	39	47	Right-handed alpha
Helix 162	AR9	U	47	60	Right-handed alpha
Helix 163	AS1	U	69	104	Right-handed alpha
Helix 164	AS2	U	108	111	Right-handed 310
Helix 165	AS3	U	112	128	Right-handed alpha
Helix 166	AS4	U	142	146	Right-handed 310
Helix 167	AS5	W	23	26	Right-handed 310
Helix 168	AS6	W	27	94	Right-handed alpha
Helix 169	AS7	X	28	35	Right-handed alpha
Helix 170	AS8	X	37	62	Right-handed alpha
Helix 171	AS9	X	69	99	Right-handed alpha
Helix 172	AT1	X	104	120	Right-handed alpha
Helix 173	AT2	X	132	144	Right-handed alpha
Helix 174	AT3	X	145	150	Right-handed 310
Helix 175	AT4	X	168	188	Right-handed alpha
Helix 176	AT5	a	34	39	Right-handed alpha
Helix 177	AT6	a	39	47	Right-handed alpha
Helix 178	AT7	a	48	52	Right-handed 310
Helix 179	AT8	a	74	78	Right-handed 310
Helix 180	AT9	a	100	105	Right-handed 310
Helix 181	AU1	a	116	141	Right-handed alpha
Helix 182	AU2	a	152	157	Right-handed 310
Helix 183	AU3	b	3	23	Right-handed alpha
Helix 184	AU4	b	29	33	Right-handed 310
Helix 185	AU5	b	34	79	Right-handed alpha
Helix 186	AU6	c	20	27	Right-handed alpha
Helix 187	AU7	c	36	41	Right-handed alpha
Helix 188	AU8	c	42	48	Right-handed 310
Helix 189	AU9	c	49	56	Right-handed alpha
Helix 190	AV1	c	60	73	Right-handed alpha
Helix 191	AV2	d	7	12	Right-handed alpha
Helix 192	AV3	d	27	64	Right-handed alpha
Helix 193	AV4	d	65	68	Right-handed 310
Helix 194	AV5	d	71	85	Right-handed alpha
Helix 195	AV6	d	90	95	Right-handed alpha
Helix 196	AV7	e	9	23	Right-handed alpha
Helix 197	AV8	e	25	39	Right-handed alpha
Helix 198	AV9	g	11	23	Right-handed alpha
Helix 199	AW1	g	23	50	Right-handed alpha
Helix 200	AW2	g	76	80	Right-handed 310
Helix 201	AW3	i	26	53	Right-handed alpha
Helix 202	AW4	i	65	70	Right-handed 310
Helix 203	AW5	i	71	82	Right-handed alpha
Helix 204	AW6	j	12	25	Right-handed alpha
Helix 205	AW7	j	26	29	Right-handed 310
Helix 206	AW8	j	32	44	Right-handed alpha
Helix 207	AW9	j	44	57	Right-handed alpha
Helix 208	AX1	n	52	72	Right-handed alpha
Helix 209	AX2	n	81	91	Right-handed alpha
Helix 210	AX3	n	95	120	Right-handed alpha
Helix 211	AX4	n	131	137	Right-handed 310
Helix 212	AX5	n	151	175	Right-handed alpha

There are 8 sheets in PDB entry 7ZM8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	51	53	first strand
Strand 2	2	58	60	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	87	89	first strand
Strand 2	2	530	532	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	104	106	first strand
Strand 2	2	508	513	anti-parallel
Strand 3	2	519	525	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	394	396	first strand
Strand 2	2	495	497	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	57	66	first strand
Strand 2	5	71	78	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	7	11	first strand
Strand 2	U	11	15	anti-parallel
Strand 3	D	79	82	anti-parallel
Strand 4	6	168	171	anti-parallel
Strand 5	W	111	112	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	65	68	first strand
Strand 2	U	29	31	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	153	154	first strand
Strand 2	d	96	97	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZM8

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZM8