Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZM9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZM9 entry

There are 2 chains in PDB entry 7ZM9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 535ALA 693
A
 SER 695ALA 1130
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7ZM9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
554 564Right-handed alpha
Helix 2
AA2
A
578 582Right-handed 310
Helix 3
AA3
A
608 613Right-handed 310
Helix 4
AA4
A
615 622Right-handed alpha
Helix 5
AA5
A
623 641Right-handed alpha
Helix 6
AA6
A
669 681Right-handed alpha
Helix 7
AA7
A
692 694Right-handed 310
Helix 8
AA8
A
695 710Right-handed alpha
Helix 9
AA9
A
726 736Right-handed alpha
Helix 10
AB1
A
769 775Right-handed alpha
Helix 11
AB2
A
801 817Right-handed alpha
Helix 12
AB3
A
819 823Right-handed 310
Helix 13
AB4
A
835 850Right-handed alpha
Helix 14
AB5
A
863 868Right-handed alpha
Helix 15
AB6
A
870 872Right-handed 310
Helix 16
AB7
A
873 889Right-handed alpha
Helix 17
AB8
A
905 909Right-handed 310
Helix 18
AB9
A
983 1001Right-handed alpha
Helix 19
AC1
A
1004 1006Right-handed 310
Helix 20
AC2
A
1007 1018Right-handed alpha
Helix 21
AC3
A
1032 1045Right-handed alpha
Helix 22
AC4
A
1061 1069Right-handed alpha
Helix 23
AC5
A
1071 1085Right-handed alpha
Helix 24
AC6
A
1086 1095Right-handed alpha
Helix 25
AC7
A
1101 1106Right-handed 310
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There are 6 sheets in PDB entry 7ZM9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
687 690first strand
Strand 2
A
653 658parallel
Strand 3
A
715 722parallel
Strand 4
A
760 768anti-parallel
Strand 5
A
540 548anti-parallel
Strand 6
A
781 790anti-parallel
Strand 7
A
948 955anti-parallel
Strand 8
A
937 943anti-parallel
Strand 9
A
825 827parallel
Strand 10
A
858 861parallel
Strand 11
A
911 913parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 571first strand
Strand 2
A
597 598anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 607first strand
Strand 2
A
1124 1125anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
890 891first strand
Strand 2
A
918 919anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
924 927first strand
Strand 2
A
930 933anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
975 981first strand
Strand 2
A
1024 1030anti-parallel
Strand 3
A
1053 1057anti-parallel
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