Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZMA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZMA entry

There are 2 chains in PDB entry 7ZMA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 1593	LEU 2199
B	ASP 1593	LEU 2199

There are 42 helices in PDB entry 7ZMA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1608	1619	Right-handed alpha
Helix 2	AA2	A	1662	1667	Right-handed 310
Helix 3	AA3	A	1669	1674	Right-handed alpha
Helix 4	AA4	A	1677	1694	Right-handed alpha
Helix 5	AA5	A	1722	1733	Right-handed alpha
Helix 6	AA6	A	1743	1754	Right-handed alpha
Helix 7	AA7	A	1767	1783	Right-handed alpha
Helix 8	AA8	A	1799	1808	Right-handed alpha
Helix 9	AA9	A	1841	1848	Right-handed alpha
Helix 10	AB1	A	1873	1889	Right-handed alpha
Helix 11	AB2	A	1891	1893	Right-handed 310
Helix 12	AB3	A	1908	1922	Right-handed alpha
Helix 13	AB4	A	1935	1940	Right-handed alpha
Helix 14	AB5	A	1945	1961	Right-handed alpha
Helix 15	AB6	A	2054	2072	Right-handed alpha
Helix 16	AB7	A	2078	2089	Right-handed alpha
Helix 17	AB8	A	2103	2116	Right-handed alpha
Helix 18	AB9	A	2135	2141	Right-handed alpha
Helix 19	AC1	A	2143	2156	Right-handed alpha
Helix 20	AC2	A	2157	2166	Right-handed alpha
Helix 21	AC3	A	2173	2177	Right-handed 310
Helix 22	AC4	B	1608	1619	Right-handed alpha
Helix 23	AC5	B	1662	1667	Right-handed 310
Helix 24	AC6	B	1669	1674	Right-handed alpha
Helix 25	AC7	B	1677	1694	Right-handed alpha
Helix 26	AC8	B	1722	1733	Right-handed alpha
Helix 27	AC9	B	1743	1754	Right-handed alpha
Helix 28	AD1	B	1767	1783	Right-handed alpha
Helix 29	AD2	B	1799	1808	Right-handed alpha
Helix 30	AD3	B	1841	1848	Right-handed alpha
Helix 31	AD4	B	1873	1889	Right-handed alpha
Helix 32	AD5	B	1891	1893	Right-handed 310
Helix 33	AD6	B	1908	1922	Right-handed alpha
Helix 34	AD7	B	1935	1940	Right-handed alpha
Helix 35	AD8	B	1945	1961	Right-handed alpha
Helix 36	AD9	B	2054	2072	Right-handed alpha
Helix 37	AE1	B	2078	2089	Right-handed alpha
Helix 38	AE2	B	2103	2116	Right-handed alpha
Helix 39	AE3	B	2135	2141	Right-handed alpha
Helix 40	AE4	B	2143	2156	Right-handed alpha
Helix 41	AE5	B	2157	2166	Right-handed alpha
Helix 42	AE6	B	2173	2177	Right-handed 310

There are 10 sheets in PDB entry 7ZMA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1759	1762	first strand
Strand 2	A	1711	1716	parallel
Strand 3	A	1787	1794	parallel
Strand 4	A	1832	1840	anti-parallel
Strand 5	A	1594	1602	anti-parallel
Strand 6	A	1854	1862	anti-parallel
Strand 7	A	2020	2027	anti-parallel
Strand 8	A	2009	2015	anti-parallel
Strand 9	A	1895	1899	parallel
Strand 10	A	1930	1933	parallel
Strand 11	A	1983	1985	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1660	1661	first strand
Strand 2	A	2195	2196	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1962	1963	first strand
Strand 2	A	1990	1991	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1996	1999	first strand
Strand 2	A	2002	2005	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2046	2052	first strand
Strand 2	A	2095	2101	anti-parallel
Strand 3	A	2125	2127	anti-parallel

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There are 11 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1759	1762	first strand
Strand 2	B	1711	1716	parallel
Strand 3	B	1787	1794	parallel
Strand 4	B	1832	1840	anti-parallel
Strand 5	B	1594	1602	anti-parallel
Strand 6	B	1854	1862	anti-parallel
Strand 7	B	2020	2027	anti-parallel
Strand 8	B	2009	2015	anti-parallel
Strand 9	B	1895	1899	parallel
Strand 10	B	1930	1933	parallel
Strand 11	B	1983	1985	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1660	1661	first strand
Strand 2	B	2195	2196	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1962	1963	first strand
Strand 2	B	1990	1991	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1996	1999	first strand
Strand 2	B	2002	2005	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2046	2052	first strand
Strand 2	B	2095	2101	anti-parallel
Strand 3	B	2125	2127	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZMA

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZMA