Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZMC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZMC entry

There are 2 chains in PDB entry 7ZMC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1591LEU 2199
B
 GLY 1590SER 1741
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 43 helices in PDB entry 7ZMC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1608 1619Right-handed alpha
Helix 2
AA2
A
1662 1667Right-handed 310
Helix 3
AA3
A
1669 1676Right-handed alpha
Helix 4
AA4
A
1677 1695Right-handed alpha
Helix 5
AA5
A
1697 1701Right-handed 310
Helix 6
AA6
A
1742 1754Right-handed alpha
Helix 7
AA7
A
1764 1766Right-handed 310
Helix 8
AA8
A
1767 1782Right-handed alpha
Helix 9
AA9
A
1841 1847Right-handed alpha
Helix 10
AB1
A
1873 1889Right-handed alpha
Helix 11
AB2
A
1891 1895Right-handed 310
Helix 12
AB3
A
1908 1922Right-handed alpha
Helix 13
AB4
A
1935 1940Right-handed alpha
Helix 14
AB5
A
1943 1961Right-handed alpha
Helix 15
AB6
A
1977 1981Right-handed 310
Helix 16
AB7
A
2054 2072Right-handed alpha
Helix 17
AB8
A
2078 2089Right-handed alpha
Helix 18
AB9
A
2103 2116Right-handed alpha
Helix 19
AC1
A
2133 2141Right-handed alpha
Helix 20
AC2
A
2142 2156Right-handed alpha
Helix 21
AC3
A
2157 2166Right-handed alpha
Helix 22
AC4
A
2172 2177Right-handed 310
Helix 23
AC5
B
1608 1619Right-handed alpha
Helix 24
AC6
B
1662 1667Right-handed 310
Helix 25
AC7
B
1669 1676Right-handed alpha
Helix 26
AC8
B
1677 1695Right-handed alpha
Helix 27
AC9
B
1697 1701Right-handed 310
Helix 28
AD1
B
1742 1754Right-handed alpha
Helix 29
AD2
B
1767 1782Right-handed alpha
Helix 30
AD3
B
1841 1847Right-handed alpha
Helix 31
AD4
B
1873 1889Right-handed alpha
Helix 32
AD5
B
1891 1895Right-handed 310
Helix 33
AD6
B
1908 1922Right-handed alpha
Helix 34
AD7
B
1935 1940Right-handed alpha
Helix 35
AD8
B
1943 1960Right-handed alpha
Helix 36
AD9
B
1977 1981Right-handed 310
Helix 37
AE1
B
2054 2072Right-handed alpha
Helix 38
AE2
B
2078 2089Right-handed alpha
Helix 39
AE3
B
2103 2116Right-handed alpha
Helix 40
AE4
B
2133 2141Right-handed alpha
Helix 41
AE5
B
2142 2156Right-handed alpha
Helix 42
AE6
B
2157 2166Right-handed alpha
Helix 43
AE7
B
2172 2177Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 7ZMC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 22 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1983 1985first strand
Strand 2
A
1930 1933parallel
Strand 3
A
1897 1899parallel
Strand 4
A
2009 2015parallel
Strand 5
A
2020 2027anti-parallel
Strand 6
A
1853 1862anti-parallel
Strand 7
A
1594 1602anti-parallel
Strand 8
A
1832 1840anti-parallel
Strand 9
A
1787 1794anti-parallel
Strand 10
A
1711 1716parallel
Strand 11
A
1759 1763parallel
Strand 12
B
1759 1763anti-parallel
Strand 13
B
1711 1717parallel
Strand 14
B
1787 1794parallel
Strand 15
B
1832 1840anti-parallel
Strand 16
B
1594 1602anti-parallel
Strand 17
B
1853 1861anti-parallel
Strand 18
B
2021 2027anti-parallel
Strand 19
B
2009 2015anti-parallel
Strand 20
B
1897 1899parallel
Strand 21
B
1930 1933parallel
Strand 22
B
1983 1985parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1962 1963first strand
Strand 2
A
1990 1991anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1996 1999first strand
Strand 2
A
2002 2005anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2046 2052first strand
Strand 2
A
2095 2101anti-parallel
Strand 3
A
2124 2128anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1660 1661first strand
Strand 2
B
2195 2196anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1962 1963first strand
Strand 2
B
1990 1991anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1996 1999first strand
Strand 2
B
2002 2005anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2046 2052first strand
Strand 2
B
2095 2101anti-parallel
Strand 3
B
2125 2128anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il