Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZME

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZME entry

There are 26 chains in PDB entry 7ZME (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	MET 1	LEU 378
2	MET 1	ALA 571
3	MET 1	HIS 114
4	MET 1	THR 537
5	MET 1	GLU 670
6	SER 3	ARG 222
8	ARG 10	ASN 86
9	MET 1	ALA 103
D	PRO 2	UNK 86
J	PRO 13	GLN 198
L	ASN 2	LYS 89
Q	GLU 57	HIS 141
R	SER 2	PHE 99
S	GLN 67	THR 140
U	MET 1	GLU 169
W	ARG 23	GLU 121
X	ASN 3	ALA 189
a	PHE 32	ASP 174
b	MET 1	GLU 81
c	PRO 14	VAL 73
d	PRO 2	SER 99
e	SER 9	TRP 45
g	THR 4	ASP 81
i	PRO 5	LYS 84
j	GLY 3	ARG 75
n	ASN 46	ALA 180

There are208 helices in PDB entry 7ZME. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	1	4	39	Right-handed alpha
Helix 2	AA2	1	48	52	Right-handed 310
Helix 3	AA3	1	53	64	Right-handed alpha
Helix 4	AA4	1	74	91	Right-handed alpha
Helix 5	AA5	1	92	95	Right-handed 310
Helix 6	AA6	1	109	132	Right-handed alpha
Helix 7	AA7	1	134	167	Right-handed alpha
Helix 8	AA8	1	170	178	Right-handed alpha
Helix 9	AA9	1	187	203	Right-handed alpha
Helix 10	AB1	1	218	222	Right-handed 310
Helix 11	AB2	1	225	252	Right-handed alpha
Helix 12	AB3	1	304	332	Right-handed alpha
Helix 13	AB4	1	338	349	Right-handed alpha
Helix 14	AB5	1	349	368	Right-handed alpha
Helix 15	AB6	2	2	14	Right-handed alpha
Helix 16	AB7	2	18	20	Right-handed 310
Helix 17	AB8	2	21	43	Right-handed alpha
Helix 18	AB9	2	61	80	Right-handed alpha
Helix 19	AC1	2	81	83	Right-handed 310
Helix 20	AC2	2	96	103	Right-handed alpha
Helix 21	AC3	2	109	114	Right-handed alpha
Helix 22	AC4	2	117	121	Right-handed 310
Helix 23	AC5	2	124	142	Right-handed alpha
Helix 24	AC6	2	144	164	Right-handed alpha
Helix 25	AC7	2	169	202	Right-handed alpha
Helix 26	AC8	2	205	217	Right-handed alpha
Helix 27	AC9	2	238	255	Right-handed alpha
Helix 28	AD1	2	262	271	Right-handed alpha
Helix 29	AD2	2	272	280	Right-handed alpha
Helix 30	AD3	2	281	298	Right-handed alpha
Helix 31	AD4	2	306	311	Right-handed 310
Helix 32	AD5	2	312	330	Right-handed alpha
Helix 33	AD6	2	331	333	Right-handed 310
Helix 34	AD7	2	335	357	Right-handed alpha
Helix 35	AD8	2	359	390	Right-handed alpha
Helix 36	AD9	2	398	403	Right-handed 310
Helix 37	AE1	2	415	419	Right-handed 310
Helix 38	AE2	2	420	424	Right-handed 310
Helix 39	AE3	2	425	441	Right-handed alpha
Helix 40	AE4	2	445	461	Right-handed alpha
Helix 41	AE5	2	463	491	Right-handed alpha
Helix 42	AE6	2	526	528	Right-handed 310
Helix 43	AE7	2	533	549	Right-handed alpha
Helix 44	AE8	2	549	570	Right-handed alpha
Helix 45	AE9	3	2	26	Right-handed alpha
Helix 46	AF1	3	56	72	Right-handed alpha
Helix 47	AF2	3	73	78	Right-handed alpha
Helix 48	AF3	3	79	108	Right-handed alpha
Helix 49	AF4	4	2	25	Right-handed alpha
Helix 50	AF5	4	71	97	Right-handed alpha
Helix 51	AF6	4	123	144	Right-handed alpha
Helix 52	AF7	4	151	172	Right-handed alpha
Helix 53	AF8	4	174	183	Right-handed alpha
Helix 54	AF9	4	185	197	Right-handed alpha
Helix 55	AG1	4	200	231	Right-handed alpha
Helix 56	AG2	4	234	240	Right-handed alpha
Helix 57	AG3	4	244	263	Right-handed alpha
Helix 58	AG4	4	269	279	Right-handed alpha
Helix 59	AG5	4	280	290	Right-handed alpha
Helix 60	AG6	4	292	303	Right-handed alpha
Helix 61	AG7	4	307	314	Right-handed alpha
Helix 62	AG8	4	314	336	Right-handed alpha
Helix 63	AG9	4	338	358	Right-handed alpha
Helix 64	AH1	4	362	389	Right-handed alpha
Helix 65	AH2	4	390	396	Right-handed alpha
Helix 66	AH3	4	399	403	Right-handed 310
Helix 67	AH4	4	405	409	Right-handed 310
Helix 68	AH5	4	410	425	Right-handed alpha
Helix 69	AH6	4	430	447	Right-handed alpha
Helix 70	AH7	4	447	455	Right-handed alpha
Helix 71	AH8	4	456	473	Right-handed alpha
Helix 72	AH9	4	490	510	Right-handed alpha
Helix 73	AI1	4	511	516	Right-handed alpha
Helix 74	AI2	4	518	523	Right-handed alpha
Helix 75	AI3	4	524	526	Right-handed 310
Helix 76	AI4	5	3	19	Right-handed alpha
Helix 77	AI5	5	19	51	Right-handed alpha
Helix 78	AI6	5	79	104	Right-handed alpha
Helix 79	AI7	5	109	130	Right-handed alpha
Helix 80	AI8	5	132	152	Right-handed alpha
Helix 81	AI9	5	157	190	Right-handed alpha
Helix 82	AJ1	5	193	201	Right-handed alpha
Helix 83	AJ2	5	202	204	Right-handed 310
Helix 84	AJ3	5	205	224	Right-handed alpha
Helix 85	AJ4	5	231	236	Right-handed alpha
Helix 86	AJ5	5	237	239	Right-handed 310
Helix 87	AJ6	5	240	247	Right-handed alpha
Helix 88	AJ7	5	251	253	Right-handed 310
Helix 89	AJ8	5	254	263	Right-handed alpha
Helix 90	AJ9	5	263	268	Right-handed alpha
Helix 91	AK1	5	270	293	Right-handed alpha
Helix 92	AK2	5	297	319	Right-handed alpha
Helix 93	AK3	5	321	350	Right-handed alpha
Helix 94	AK4	5	355	359	Right-handed 310
Helix 95	AK5	5	366	382	Right-handed alpha
Helix 96	AK6	5	386	402	Right-handed alpha
Helix 97	AK7	5	404	433	Right-handed alpha
Helix 98	AK8	5	440	445	Right-handed alpha
Helix 99	AK9	5	467	493	Right-handed alpha
Helix 100	AL1	5	508	512	Right-handed 310
Helix 101	AL2	5	513	520	Right-handed alpha
Helix 102	AL3	5	522	543	Right-handed alpha
Helix 103	AL4	5	548	557	Right-handed alpha
Helix 104	AL5	5	557	569	Right-handed alpha
Helix 105	AL6	5	572	581	Right-handed alpha
Helix 106	AL7	5	581	596	Right-handed alpha
Helix 107	AL8	5	599	604	Right-handed alpha
Helix 108	AL9	5	605	623	Right-handed alpha
Helix 109	AM1	5	627	648	Right-handed alpha
Helix 110	AM2	5	651	668	Right-handed alpha
Helix 111	AM3	6	20	40	Right-handed alpha
Helix 112	AM4	6	42	64	Right-handed alpha
Helix 113	AM5	6	66	92	Right-handed alpha
Helix 114	AM6	6	93	100	Right-handed alpha
Helix 115	AM7	6	106	121	Right-handed alpha
Helix 116	AM8	6	126	131	Right-handed alpha
Helix 117	AM9	6	183	193	Right-handed alpha
Helix 118	AN1	6	196	219	Right-handed alpha
Helix 119	AN2	8	13	19	Right-handed alpha
Helix 120	AN3	8	23	27	Right-handed 310
Helix 121	AN4	8	28	32	Right-handed 310
Helix 122	AN5	8	33	44	Right-handed alpha
Helix 123	AN6	8	51	71	Right-handed alpha
Helix 124	AN7	8	72	80	Right-handed alpha
Helix 125	AN8	9	14	29	Right-handed alpha
Helix 126	AN9	9	33	38	Right-handed 310
Helix 127	AO1	9	39	53	Right-handed alpha
Helix 128	AO2	9	53	74	Right-handed alpha
Helix 129	AO3	9	81	87	Right-handed alpha
Helix 130	AO4	9	93	101	Right-handed alpha
Helix 131	AO5	D	8	33	Right-handed alpha
Helix 132	AO6	D	43	58	Right-handed alpha
Helix 133	AO7	J	15	41	Right-handed alpha
Helix 134	AO8	J	47	52	Right-handed 310
Helix 135	AO9	J	55	81	Right-handed alpha
Helix 136	AP1	J	84	104	Right-handed alpha
Helix 137	AP2	J	105	126	Right-handed alpha
Helix 138	AP3	J	139	150	Right-handed alpha
Helix 139	AP4	J	155	163	Right-handed alpha
Helix 140	AP5	J	172	186	Right-handed alpha
Helix 141	AP6	L	3	17	Right-handed alpha
Helix 142	AP7	L	21	48	Right-handed alpha
Helix 143	AP8	L	50	82	Right-handed alpha
Helix 144	AP9	Q	60	73	Right-handed alpha
Helix 145	AQ1	Q	80	84	Right-handed 310
Helix 146	AQ2	Q	97	113	Right-handed alpha
Helix 147	AQ3	Q	126	137	Right-handed alpha
Helix 148	AQ4	R	4	22	Right-handed alpha
Helix 149	AQ5	R	24	42	Right-handed alpha
Helix 150	AQ6	R	47	65	Right-handed alpha
Helix 151	AQ7	S	74	78	Right-handed 310
Helix 152	AQ8	S	89	96	Right-handed alpha
Helix 153	AQ9	S	96	109	Right-handed alpha
Helix 154	AR1	S	115	130	Right-handed alpha
Helix 155	AR2	U	32	39	Right-handed alpha
Helix 156	AR3	U	39	61	Right-handed alpha
Helix 157	AR4	U	64	69	Right-handed alpha
Helix 158	AR5	U	69	90	Right-handed alpha
Helix 159	AR6	U	91	104	Right-handed alpha
Helix 160	AR7	U	108	111	Right-handed 310
Helix 161	AR8	U	112	128	Right-handed alpha
Helix 162	AR9	U	142	146	Right-handed 310
Helix 163	AS1	W	23	26	Right-handed 310
Helix 164	AS2	W	27	94	Right-handed alpha
Helix 165	AS3	X	28	35	Right-handed alpha
Helix 166	AS4	X	37	62	Right-handed alpha
Helix 167	AS5	X	69	100	Right-handed alpha
Helix 168	AS6	X	104	121	Right-handed alpha
Helix 169	AS7	X	132	144	Right-handed alpha
Helix 170	AS8	X	145	150	Right-handed 310
Helix 171	AS9	X	168	188	Right-handed alpha
Helix 172	AT1	a	34	39	Right-handed alpha
Helix 173	AT2	a	39	47	Right-handed alpha
Helix 174	AT3	a	48	52	Right-handed 310
Helix 175	AT4	a	74	78	Right-handed 310
Helix 176	AT5	a	100	104	Right-handed 310
Helix 177	AT6	a	116	141	Right-handed alpha
Helix 178	AT7	a	152	165	Right-handed 310
Helix 179	AT8	b	3	23	Right-handed alpha
Helix 180	AT9	b	29	33	Right-handed 310
Helix 181	AU1	b	34	80	Right-handed alpha
Helix 182	AU2	c	20	27	Right-handed alpha
Helix 183	AU3	c	36	41	Right-handed alpha
Helix 184	AU4	c	42	44	Right-handed 310
Helix 185	AU5	c	49	54	Right-handed alpha
Helix 186	AU6	c	60	73	Right-handed alpha
Helix 187	AU7	d	7	12	Right-handed alpha
Helix 188	AU8	d	27	64	Right-handed alpha
Helix 189	AU9	d	65	68	Right-handed 310
Helix 190	AV1	d	71	85	Right-handed alpha
Helix 191	AV2	d	90	95	Right-handed alpha
Helix 192	AV3	e	10	34	Right-handed alpha
Helix 193	AV4	e	34	39	Right-handed alpha
Helix 194	AV5	g	11	23	Right-handed alpha
Helix 195	AV6	g	23	50	Right-handed alpha
Helix 196	AV7	g	76	80	Right-handed 310
Helix 197	AV8	i	26	53	Right-handed alpha
Helix 198	AV9	i	65	70	Right-handed 310
Helix 199	AW1	i	71	82	Right-handed alpha
Helix 200	AW2	j	12	25	Right-handed alpha
Helix 201	AW3	j	26	29	Right-handed 310
Helix 202	AW4	j	32	44	Right-handed alpha
Helix 203	AW5	j	44	57	Right-handed alpha
Helix 204	AW6	n	52	72	Right-handed alpha
Helix 205	AW7	n	81	91	Right-handed alpha
Helix 206	AW8	n	95	120	Right-handed alpha
Helix 207	AW9	n	131	137	Right-handed 310
Helix 208	AX1	n	151	179	Right-handed alpha

There are 7 sheets in PDB entry 7ZME. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	51	53	first strand
Strand 2	2	58	60	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	87	89	first strand
Strand 2	2	530	532	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	104	106	first strand
Strand 2	2	508	513	anti-parallel
Strand 3	2	519	525	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	394	395	first strand
Strand 2	2	496	497	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	57	67	first strand
Strand 2	5	70	78	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	7	11	first strand
Strand 2	U	11	15	anti-parallel
Strand 3	D	79	82	anti-parallel
Strand 4	6	169	171	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	153	154	first strand
Strand 2	d	96	97	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZME

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZME