Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZO0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZO0 entry

There is 1 chain in PDB entry 7ZO0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 25LYS 785
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 7ZO0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
44 48Right-handed 310
Helix 2
AA2
A
50 54Right-handed 310
Helix 3
AA3
A
58 67Right-handed alpha
Helix 4
AA4
A
265 269Right-handed 310
Helix 5
AA5
A
274 280Right-handed alpha
Helix 6
AA6
A
282 288Right-handed alpha
Helix 7
AA7
A
290 307Right-handed alpha
Helix 8
AA8
A
317 322Right-handed alpha
Helix 9
AA9
A
324 335Right-handed alpha
Helix 10
AB1
A
338 355Right-handed alpha
Helix 11
AB2
A
376 381Right-handed 310
Helix 12
AB3
A
386 392Right-handed alpha
Helix 13
AB4
A
400 424Right-handed alpha
Helix 14
AB5
A
425 429Right-handed 310
Helix 15
AB6
A
458 475Right-handed alpha
Helix 16
AB7
A
476 483Right-handed alpha
Helix 17
AB8
A
483 499Right-handed alpha
Helix 18
AB9
A
517 524Right-handed alpha
Helix 19
AC1
A
549 571Right-handed alpha
Helix 20
AC2
A
573 586Right-handed alpha
Helix 21
AC3
A
614 618Right-handed 310
Helix 22
AC4
A
631 644Right-handed alpha
Helix 23
AC5
A
648 652Right-handed 310
Helix 24
AC6
A
655 667Right-handed alpha
Helix 25
AC7
A
669 684Right-handed alpha
Helix 26
AC8
A
698 712Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 7ZO0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
31 34first strand
Strand 2
A
142 149anti-parallel
Strand 3
A
154 161anti-parallel
Strand 4
A
164 173anti-parallel
Strand 5
A
178 185anti-parallel
Strand 6
A
251 260anti-parallel
Strand 7
A
223 233anti-parallel
Strand 8
A
211 217anti-parallel
Strand 9
A
204 208anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
68 71first strand
Strand 2
A
75 81anti-parallel
Strand 3
A
85 92anti-parallel
Strand 4
A
124 130anti-parallel
Strand 5
A
191 198anti-parallel
Strand 6
A
243 249anti-parallel
Strand 7
A
236 238anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
310 312first strand
Strand 2
A
732 740anti-parallel
Strand 3
A
744 751anti-parallel
Strand 4
A
754 762anti-parallel
Strand 5
A
782 783parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
382 383first strand
Strand 2
A
441 445anti-parallel
Strand 3
A
451 456anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
500 502first strand
Strand 2
A
531 533anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
713 714first strand
Strand 2
A
720 722anti-parallel
Strand 3
A
767 772parallel
Strand 4
A
775 780anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il