Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZOO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZOO entry

There are 4 chains in PDB entry 7ZOO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 888ILE 958
A
 GLY 960THR 1012
B
 SER 887ILE 958
B
 GLY 960THR 1012
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7ZOO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
902 906Right-handed 310
Helix 2
AA2
A
917 921Right-handed 310
Helix 3
AA3
A
944 948Right-handed 310
Helix 4
AA4
A
959 959Right-handed 310
Helix 5
AA5
A
960 963Right-handed 310
Helix 6
AA6
A
986 990Right-handed 310
Helix 7
AA7
A
1001 1005Right-handed 310
Helix 8
AA8
B
902 906Right-handed 310
Helix 9
AA9
B
917 921Right-handed 310
Helix 10
AB1
B
944 948Right-handed 310
Helix 11
AB2
B
959 959Right-handed 310
Helix 12
AB3
B
960 962Right-handed 310
Helix 13
AB4
B
986 990Right-handed 310
Helix 14
AB5
B
1001 1004Right-handed 310
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There are 9 sheets in PDB entry 7ZOO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
974 977first strand
Strand 2
A
964 968anti-parallel
Strand 3
A
931 935anti-parallel
Strand 4
A
922 928anti-parallel
Strand 5
A
889 893anti-parallel
Strand 6
A
1007 1010anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
899 901first strand
Strand 2
A
910 913anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
941 943first strand
Strand 2
A
952 955anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
983 985first strand
Strand 2
A
994 997anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
931 935first strand
Strand 2
B
922 928anti-parallel
Strand 3
B
889 894anti-parallel
Strand 4
B
1006 1010anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
899 901first strand
Strand 2
B
910 913anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
941 943first strand
Strand 2
B
952 955anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
964 968first strand
Strand 2
B
974 978anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
983 985first strand
Strand 2
B
994 997anti-parallel
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