Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZOQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZOQ entry

There are 3 chains in PDB entry 7ZOQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	GLU 822
B	GLN 16	LEU 1792
C	U 2	G 40

There are 90 helices in PDB entry 7ZOQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	23	Right-handed 310
Helix 2	AA2	A	25	35	Right-handed alpha
Helix 3	AA3	A	60	79	Right-handed alpha
Helix 4	AA4	A	83	118	Right-handed alpha
Helix 5	AA5	A	124	149	Right-handed alpha
Helix 6	AA6	A	159	176	Right-handed alpha
Helix 7	AA7	A	179	192	Right-handed alpha
Helix 8	AA8	A	202	212	Right-handed alpha
Helix 9	AA9	A	224	245	Right-handed alpha
Helix 10	AB1	A	252	266	Right-handed alpha
Helix 11	AB2	A	289	307	Right-handed alpha
Helix 12	AB3	A	311	325	Right-handed alpha
Helix 13	AB4	A	329	346	Right-handed alpha
Helix 14	AB5	A	348	366	Right-handed alpha
Helix 15	AB6	A	380	397	Right-handed alpha
Helix 16	AB7	A	400	418	Right-handed alpha
Helix 17	AB8	A	426	433	Right-handed alpha
Helix 18	AB9	A	436	449	Right-handed alpha
Helix 19	AC1	A	455	460	Right-handed alpha
Helix 20	AC2	A	516	533	Right-handed alpha
Helix 21	AC3	A	534	540	Right-handed 310
Helix 22	AC4	A	541	556	Right-handed alpha
Helix 23	AC5	A	557	560	Right-handed 310
Helix 24	AC6	A	561	571	Right-handed alpha
Helix 25	AC7	A	587	593	Right-handed 310
Helix 26	AC8	A	594	598	Right-handed 310
Helix 27	AC9	A	606	611	Right-handed alpha
Helix 28	AD1	A	645	652	Right-handed alpha
Helix 29	AD2	A	653	658	Right-handed alpha
Helix 30	AD3	A	667	677	Right-handed alpha
Helix 31	AD4	A	694	698	Right-handed 310
Helix 32	AD5	A	707	713	Right-handed alpha
Helix 33	AD6	A	728	733	Right-handed alpha
Helix 34	AD7	A	745	751	Right-handed alpha
Helix 35	AD8	A	752	754	Right-handed 310
Helix 36	AD9	A	766	780	Right-handed alpha
Helix 37	AE1	A	784	791	Right-handed alpha
Helix 38	AE2	A	792	796	Right-handed 310
Helix 39	AE3	A	800	808	Right-handed alpha
Helix 40	AE4	B	36	40	Right-handed 310
Helix 41	AE5	B	42	47	Right-handed alpha
Helix 42	AE6	B	68	87	Right-handed alpha
Helix 43	AE7	B	137	144	Right-handed alpha
Helix 44	AE8	B	145	148	Right-handed 310
Helix 45	AE9	B	227	245	Right-handed alpha
Helix 46	AF1	B	291	310	Right-handed alpha
Helix 47	AF2	B	311	313	Right-handed 310
Helix 48	AF3	B	314	329	Right-handed alpha
Helix 49	AF4	B	361	377	Right-handed alpha
Helix 50	AF5	B	381	401	Right-handed alpha
Helix 51	AF6	B	478	495	Right-handed alpha
Helix 52	AF7	B	509	516	Right-handed alpha
Helix 53	AF8	B	579	591	Right-handed alpha
Helix 54	AF9	B	599	603	Right-handed 310
Helix 55	AG1	B	622	630	Right-handed alpha
Helix 56	AG2	B	672	676	Right-handed 310
Helix 57	AG3	B	731	748	Right-handed alpha
Helix 58	AG4	B	759	765	Right-handed alpha
Helix 59	AG5	B	834	851	Right-handed alpha
Helix 60	AG6	B	858	862	Right-handed 310
Helix 61	AG7	B	884	889	Right-handed alpha
Helix 62	AG8	B	978	995	Right-handed alpha
Helix 63	AG9	B	1058	1065	Right-handed alpha
Helix 64	AH1	B	1075	1084	Right-handed alpha
Helix 65	AH2	B	1088	1101	Right-handed alpha
Helix 66	AH3	B	1107	1120	Right-handed alpha
Helix 67	AH4	B	1121	1124	Right-handed 310
Helix 68	AH5	B	1125	1133	Right-handed alpha
Helix 69	AH6	B	1141	1149	Right-handed alpha
Helix 70	AH7	B	1155	1165	Right-handed alpha
Helix 71	AH8	B	1172	1184	Right-handed alpha
Helix 72	AH9	B	1189	1196	Right-handed alpha
Helix 73	AI1	B	1197	1199	Right-handed 310
Helix 74	AI2	B	1206	1216	Right-handed alpha
Helix 75	AI3	B	1219	1229	Right-handed alpha
Helix 76	AI4	B	1237	1259	Right-handed alpha
Helix 77	AI5	B	1274	1283	Right-handed alpha
Helix 78	AI6	B	1431	1452	Right-handed alpha
Helix 79	AI7	B	1500	1504	Right-handed 310
Helix 80	AI8	B	1518	1523	Right-handed 310
Helix 81	AI9	B	1524	1532	Right-handed alpha
Helix 82	AJ1	B	1545	1552	Right-handed alpha
Helix 83	AJ2	B	1574	1579	Right-handed 310
Helix 84	AJ3	B	1613	1621	Right-handed alpha
Helix 85	AJ4	B	1659	1671	Right-handed alpha
Helix 86	AJ5	B	1683	1687	Right-handed 310
Helix 87	AJ6	B	1706	1723	Right-handed alpha
Helix 88	AJ7	B	1726	1736	Right-handed alpha
Helix 89	AJ8	B	1763	1768	Right-handed alpha
Helix 90	AJ9	B	1772	1777	Right-handed alpha

There are 26 sheets in PDB entry 7ZOQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	509	510	first strand
Strand 2	A	496	503	anti-parallel
Strand 3	A	482	489	anti-parallel
Strand 4	A	581	585	parallel
Strand 5	A	612	615	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	663	664	first strand
Strand 2	A	638	639	parallel
Strand 3	A	681	685	parallel
Strand 4	A	722	725	parallel
Strand 5	A	757	761	parallel
Strand 6	A	810	814	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	687	689	first strand
Strand 2	A	699	701	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	163	first strand
Strand 2	B	213	220	anti-parallel
Strand 3	B	167	168	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	163	first strand
Strand 2	B	213	220	anti-parallel
Strand 3	B	17	25	anti-parallel
Strand 4	B	253	257	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	30	first strand
Strand 2	B	203	206	anti-parallel
Strand 3	B	183	185	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	54	first strand
Strand 2	B	65	66	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	91	first strand
Strand 2	B	94	95	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	188	190	first strand
Strand 2	B	197	200	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	519	521	first strand
Strand 2	B	564	573	anti-parallel
Strand 3	B	435	445	anti-parallel
Strand 4	B	607	618	anti-parallel
Strand 5	B	641	642	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	453	first strand
Strand 2	B	466	467	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	476	477	first strand
Strand 2	B	524	525	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	538	first strand
Strand 2	B	554	558	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	541	542	first strand
Strand 2	B	547	548	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	653	662	first strand
Strand 2	B	821	830	anti-parallel
Strand 3	B	779	782	anti-parallel
Strand 4	B	727	730	anti-parallel
Strand 5	B	687	688	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	653	662	first strand
Strand 2	B	821	830	anti-parallel
Strand 3	B	774	776	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	790	792	first strand
Strand 2	B	808	810	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	902	904	first strand
Strand 2	B	1787	1790	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	907	910	first strand
Strand 2	B	1605	1608	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1560	1562	first strand
Strand 2	B	1648	1658	anti-parallel
Strand 3	B	937	947	anti-parallel
Strand 4	B	1690	1699	anti-parallel
Strand 5	B	1678	1679	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	954	959	first strand
Strand 2	B	965	968	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1044	1047	first strand
Strand 2	B	1418	1421	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1169	1170	first strand
Strand 2	B	1134	1139	anti-parallel
Strand 3	B	1200	1204	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1378	1379	first strand
Strand 2	B	1391	1392	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1474	1477	first strand
Strand 2	B	1484	1488	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1581	1583	first strand
Strand 2	B	1638	1640	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZOQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZOQ