Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZPA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZPA entry

There are 6 chains in PDB entry 7ZPA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 15SER 308
A
 SER 310PHE 464
B
 GLU 7SER 308
B
 SER 310PHE 464
C
 C 1 T 48
D
 A 2 G 48
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 7ZPA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 31Right-handed alpha
Helix 2
AA2
A
44 50Right-handed alpha
Helix 3
AA3
A
52 66Right-handed alpha
Helix 4
AA4
A
120 132Right-handed alpha
Helix 5
AA5
A
148 164Right-handed alpha
Helix 6
AA6
A
176 190Right-handed alpha
Helix 7
AA7
A
204 212Right-handed alpha
Helix 8
AA8
A
227 233Right-handed alpha
Helix 9
AA9
A
254 267Right-handed alpha
Helix 10
AB1
A
291 295Right-handed 310
Helix 11
AB2
A
323 334Right-handed alpha
Helix 12
AB3
A
342 356Right-handed alpha
Helix 13
AB4
A
356 381Right-handed alpha
Helix 14
AB5
A
407 418Right-handed alpha
Helix 15
AB6
A
426 428Right-handed 310
Helix 16
AB7
A
450 462Right-handed alpha
Helix 17
AB8
B
15 31Right-handed alpha
Helix 18
AB9
B
42 49Right-handed alpha
Helix 19
AC1
B
52 67Right-handed alpha
Helix 20
AC2
B
120 132Right-handed alpha
Helix 21
AC3
B
148 164Right-handed alpha
Helix 22
AC4
B
168 172Right-handed 310
Helix 23
AC5
B
176 190Right-handed alpha
Helix 24
AC6
B
204 210Right-handed alpha
Helix 25
AC7
B
227 233Right-handed alpha
Helix 26
AC8
B
254 268Right-handed alpha
Helix 27
AC9
B
291 296Right-handed 310
Helix 28
AD1
B
323 334Right-handed alpha
Helix 29
AD2
B
342 355Right-handed alpha
Helix 30
AD3
B
356 381Right-handed alpha
Helix 31
AD4
B
407 418Right-handed alpha
Helix 32
AD5
B
447 449Right-handed 310
Helix 33
AD6
B
450 462Right-handed alpha
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There are 8 sheets in PDB entry 7ZPA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 72first strand
Strand 2
A
76 79anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 108first strand
Strand 2
A
420 421parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 175first strand
Strand 2
A
318 321anti-parallel
Strand 3
A
301 304anti-parallel
Strand 4
A
272 276parallel
Strand 5
A
238 241parallel
Strand 6
A
194 198parallel
Strand 7
A
215 219parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 390first strand
Strand 2
A
397 402anti-parallel
Strand 3
A
438 442anti-parallel
Strand 4
A
423 424anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 71first strand
Strand 2
B
77 79anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 175first strand
Strand 2
B
318 320anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 217first strand
Strand 2
B
194 196parallel
Strand 3
B
238 241parallel
Strand 4
B
272 276parallel
Strand 5
B
301 304parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
387 389first strand
Strand 2
B
397 402anti-parallel
Strand 3
B
438 442anti-parallel
Strand 4
B
423 424anti-parallel
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