Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZPI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZPI entry

There are 2 chains in PDB entry 7ZPI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 739GLN 1910
B
 U 1 A 59
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7ZPI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
794 798Right-handed 310
Helix 2
AA2
A
839 856Right-handed alpha
Helix 3
AA3
A
893 903Right-handed alpha
Helix 4
AA4
A
904 907Right-handed 310
Helix 5
AA5
A
923 927Right-handed 310
Helix 6
AA6
A
967 977Right-handed alpha
Helix 7
AA7
A
1034 1036Right-handed 310
Helix 8
AA8
A
1045 1079Right-handed alpha
Helix 9
AA9
A
1293 1301Right-handed alpha
Helix 10
AB1
A
1303 1307Right-handed 310
Helix 11
AB2
A
1312 1335Right-handed alpha
Helix 12
AB3
A
1339 1351Right-handed alpha
Helix 13
AB4
A
1352 1363Right-handed alpha
Helix 14
AB5
A
1364 1369Right-handed alpha
Helix 15
AB6
A
1375 1380Right-handed alpha
Helix 16
AB7
A
1552 1583Right-handed alpha
Helix 17
AB8
A
1650 1657Right-handed alpha
Helix 18
AB9
A
1659 1667Right-handed alpha
Helix 19
AC1
A
1673 1682Right-handed alpha
Helix 20
AC2
A
1695 1717Right-handed alpha
Helix 21
AC3
A
1722 1734Right-handed alpha
Helix 22
AC4
A
1735 1746Right-handed alpha
Helix 23
AC5
A
1747 1752Right-handed alpha
Helix 24
AC6
A
1756 1773Right-handed alpha
Helix 25
AC7
A
1799 1817Right-handed alpha
Helix 26
AC8
A
1820 1842Right-handed alpha
Helix 27
AC9
A
1846 1855Right-handed alpha
Helix 28
AD1
A
1890 1910Right-handed alpha
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There are 6 sheets in PDB entry 7ZPI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
746 750first strand
Strand 2
A
1547 1551anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
816 820first strand
Strand 2
A
823 836anti-parallel
Strand 3
A
768 780anti-parallel
Strand 4
A
801 806anti-parallel
Strand 5
A
877 883anti-parallel
Strand 6
A
890 892anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
865 867first strand
Strand 2
A
1385 1387anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
987 992first strand
Strand 2
A
945 951anti-parallel
Strand 3
A
930 934anti-parallel
Strand 4
A
1038 1044anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1859 1861first strand
Strand 2
A
1872 1878anti-parallel
Strand 3
A
1865 1866anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1859 1861first strand
Strand 2
A
1872 1878anti-parallel
Strand 3
A
1882 1888anti-parallel
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