Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZPO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZPO entry

There are 10 chains in PDB entry 7ZPO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	LYS 6	ASP 137
D	LYS 6	ASP 137
E	LYS 6	ASP 137
F	LYS 6	ASP 137
I	ARG 7	GLY 455
A	LYS 6	ASP 137
B	LYS 6	LYS 138
J	LYS 6	ASP 137
L	LYS 6	LYS 138
M	ARG 7	GLY 455

There are 83 helices in PDB entry 7ZPO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	H	14	27	Right-handed alpha
Helix 2	AA2	H	37	46	Right-handed alpha
Helix 3	AA3	H	58	66	Right-handed alpha
Helix 4	AA4	H	80	94	Right-handed alpha
Helix 5	AA5	H	105	116	Right-handed alpha
Helix 6	AA6	H	122	137	Right-handed alpha
Helix 7	AA7	D	14	27	Right-handed alpha
Helix 8	AA8	D	37	46	Right-handed alpha
Helix 9	AA9	D	58	66	Right-handed alpha
Helix 10	AB1	D	67	70	Right-handed 310
Helix 11	AB2	D	80	95	Right-handed alpha
Helix 12	AB3	D	105	116	Right-handed alpha
Helix 13	AB4	D	122	137	Right-handed alpha
Helix 14	AB5	E	14	28	Right-handed alpha
Helix 15	AB6	E	37	46	Right-handed alpha
Helix 16	AB7	E	58	65	Right-handed alpha
Helix 17	AB8	E	80	95	Right-handed alpha
Helix 18	AB9	E	105	116	Right-handed alpha
Helix 19	AC1	E	122	137	Right-handed alpha
Helix 20	AC2	F	14	28	Right-handed alpha
Helix 21	AC3	F	37	46	Right-handed alpha
Helix 22	AC4	F	58	66	Right-handed alpha
Helix 23	AC5	F	67	70	Right-handed 310
Helix 24	AC6	F	80	95	Right-handed alpha
Helix 25	AC7	F	105	116	Right-handed alpha
Helix 26	AC8	F	122	137	Right-handed alpha
Helix 27	AC9	I	23	44	Right-handed alpha
Helix 28	AD1	I	54	67	Right-handed alpha
Helix 29	AD2	I	75	80	Right-handed alpha
Helix 30	AD3	I	81	122	Right-handed alpha
Helix 31	AD4	I	133	165	Right-handed alpha
Helix 32	AD5	I	165	182	Right-handed alpha
Helix 33	AD6	I	193	197	Right-handed 310
Helix 34	AD7	I	199	214	Right-handed alpha
Helix 35	AD8	I	216	227	Right-handed alpha
Helix 36	AD9	I	235	261	Right-handed alpha
Helix 37	AE1	I	271	287	Right-handed alpha
Helix 38	AE2	I	300	314	Right-handed alpha
Helix 39	AE3	I	325	342	Right-handed alpha
Helix 40	AE4	I	354	383	Right-handed alpha
Helix 41	AE5	I	386	399	Right-handed alpha
Helix 42	AE6	I	412	437	Right-handed alpha
Helix 43	AE7	A	14	27	Right-handed alpha
Helix 44	AE8	A	37	46	Right-handed alpha
Helix 45	AE9	A	58	66	Right-handed alpha
Helix 46	AF1	A	80	95	Right-handed alpha
Helix 47	AF2	A	105	116	Right-handed alpha
Helix 48	AF3	A	122	137	Right-handed alpha
Helix 49	AF4	B	14	27	Right-handed alpha
Helix 50	AF5	B	37	46	Right-handed alpha
Helix 51	AF6	B	58	66	Right-handed alpha
Helix 52	AF7	B	67	70	Right-handed 310
Helix 53	AF8	B	80	95	Right-handed alpha
Helix 54	AF9	B	105	116	Right-handed alpha
Helix 55	AG1	B	122	136	Right-handed alpha
Helix 56	AG2	J	14	27	Right-handed alpha
Helix 57	AG3	J	37	46	Right-handed alpha
Helix 58	AG4	J	58	65	Right-handed alpha
Helix 59	AG5	J	80	95	Right-handed alpha
Helix 60	AG6	J	105	116	Right-handed alpha
Helix 61	AG7	J	122	137	Right-handed alpha
Helix 62	AG8	L	14	28	Right-handed alpha
Helix 63	AG9	L	37	46	Right-handed alpha
Helix 64	AH1	L	58	66	Right-handed alpha
Helix 65	AH2	L	80	95	Right-handed alpha
Helix 66	AH3	L	105	116	Right-handed alpha
Helix 67	AH4	L	122	137	Right-handed alpha
Helix 68	AH5	M	23	45	Right-handed alpha
Helix 69	AH6	M	54	67	Right-handed alpha
Helix 70	AH7	M	75	80	Right-handed alpha
Helix 71	AH8	M	81	122	Right-handed alpha
Helix 72	AH9	M	133	165	Right-handed alpha
Helix 73	AI1	M	165	182	Right-handed alpha
Helix 74	AI2	M	193	197	Right-handed 310
Helix 75	AI3	M	199	214	Right-handed alpha
Helix 76	AI4	M	216	227	Right-handed alpha
Helix 77	AI5	M	235	261	Right-handed alpha
Helix 78	AI6	M	271	287	Right-handed alpha
Helix 79	AI7	M	300	314	Right-handed alpha
Helix 80	AI8	M	325	341	Right-handed alpha
Helix 81	AI9	M	354	383	Right-handed alpha
Helix 82	AJ1	M	386	399	Right-handed alpha
Helix 83	AJ2	M	412	439	Right-handed alpha

There are 10 sheets in PDB entry 7ZPO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	50	53	first strand
Strand 2	H	31	35	parallel
Strand 3	H	8	11	parallel
Strand 4	H	72	75	parallel
Strand 5	H	98	102	parallel
Strand 6	H	119	121	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	53	first strand
Strand 2	D	30	35	parallel
Strand 3	D	7	11	parallel
Strand 4	D	72	75	parallel
Strand 5	D	98	102	parallel
Strand 6	D	119	121	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	119	121	first strand
Strand 2	E	99	102	parallel
Strand 3	E	72	75	parallel
Strand 4	E	7	11	parallel
Strand 5	E	30	35	parallel
Strand 6	E	50	54	parallel
Strand 7	I	10	11	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	50	53	first strand
Strand 2	F	30	35	parallel
Strand 3	F	7	11	parallel
Strand 4	F	72	75	parallel
Strand 5	F	98	102	parallel
Strand 6	F	119	121	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	346	348	first strand
Strand 2	I	351	353	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	53	first strand
Strand 2	A	31	35	parallel
Strand 3	A	8	11	parallel
Strand 4	A	72	75	parallel
Strand 5	A	98	102	parallel
Strand 6	A	119	121	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	53	first strand
Strand 2	B	30	35	parallel
Strand 3	B	7	11	parallel
Strand 4	B	72	75	parallel
Strand 5	B	98	102	parallel
Strand 6	B	119	121	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	119	121	first strand
Strand 2	J	99	102	parallel
Strand 3	J	72	75	parallel
Strand 4	J	7	11	parallel
Strand 5	J	30	35	parallel
Strand 6	J	50	54	parallel
Strand 7	M	10	11	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	50	53	first strand
Strand 2	L	30	35	parallel
Strand 3	L	7	11	parallel
Strand 4	L	72	75	parallel
Strand 5	L	98	102	parallel
Strand 6	L	119	121	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	346	348	first strand
Strand 2	M	351	353	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZPO

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZPO