Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZQP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZQP entry

There are 6 chains in PDB entry 7ZQP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
d	MET 1	GLU 720
j	THR 1085	ARG 1127
h	THR 1085	ARG 1127
i	THR 1085	ARG 1127
c	MET 1	GLU 720
b	MET 1	GLU 720

There are 60 helices in PDB entry 7ZQP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	d	5	15	Right-handed alpha
Helix 2	AA2	d	85	96	Right-handed alpha
Helix 3	AA3	d	162	167	Right-handed 310
Helix 4	AA4	d	174	179	Right-handed alpha
Helix 5	AA5	d	318	325	Right-handed alpha
Helix 6	AA6	d	338	343	Right-handed alpha
Helix 7	AA7	d	380	389	Right-handed alpha
Helix 8	AA8	d	392	399	Right-handed alpha
Helix 9	AA9	d	401	406	Right-handed 310
Helix 10	AB1	d	459	470	Right-handed alpha
Helix 11	AB2	d	478	482	Right-handed 310
Helix 12	AB3	d	483	495	Right-handed alpha
Helix 13	AB4	d	502	506	Right-handed 310
Helix 14	AB5	d	509	513	Right-handed 310
Helix 15	AB6	d	536	549	Right-handed alpha
Helix 16	AB7	d	587	592	Right-handed alpha
Helix 17	AB8	d	616	623	Right-handed alpha
Helix 18	AB9	d	639	654	Right-handed alpha
Helix 19	AC1	j	1105	1113	Right-handed alpha
Helix 20	AC2	h	1105	1113	Right-handed alpha
Helix 21	AC3	i	1105	1113	Right-handed alpha
Helix 22	AC4	c	5	15	Right-handed alpha
Helix 23	AC5	c	85	96	Right-handed alpha
Helix 24	AC6	c	161	167	Right-handed 310
Helix 25	AC7	c	174	180	Right-handed alpha
Helix 26	AC8	c	318	325	Right-handed alpha
Helix 27	AC9	c	337	341	Right-handed 310
Helix 28	AD1	c	380	389	Right-handed alpha
Helix 29	AD2	c	392	399	Right-handed alpha
Helix 30	AD3	c	459	468	Right-handed alpha
Helix 31	AD4	c	478	482	Right-handed 310
Helix 32	AD5	c	483	494	Right-handed alpha
Helix 33	AD6	c	509	513	Right-handed 310
Helix 34	AD7	c	536	549	Right-handed alpha
Helix 35	AD8	c	576	578	Right-handed 310
Helix 36	AD9	c	587	592	Right-handed alpha
Helix 37	AE1	c	616	623	Right-handed alpha
Helix 38	AE2	c	639	654	Right-handed alpha
Helix 39	AE3	c	665	669	Right-handed 310
Helix 40	AE4	b	5	15	Right-handed alpha
Helix 41	AE5	b	85	96	Right-handed alpha
Helix 42	AE6	b	161	166	Right-handed 310
Helix 43	AE7	b	174	180	Right-handed alpha
Helix 44	AE8	b	196	202	Right-handed 310
Helix 45	AE9	b	318	326	Right-handed alpha
Helix 46	AF1	b	338	343	Right-handed alpha
Helix 47	AF2	b	380	389	Right-handed alpha
Helix 48	AF3	b	392	399	Right-handed alpha
Helix 49	AF4	b	401	410	Right-handed 310
Helix 50	AF5	b	459	469	Right-handed alpha
Helix 51	AF6	b	478	482	Right-handed 310
Helix 52	AF7	b	483	494	Right-handed alpha
Helix 53	AF8	b	502	506	Right-handed 310
Helix 54	AF9	b	509	513	Right-handed 310
Helix 55	AG1	b	536	549	Right-handed alpha
Helix 56	AG2	b	587	592	Right-handed alpha
Helix 57	AG3	b	603	606	Right-handed 310
Helix 58	AG4	b	616	623	Right-handed alpha
Helix 59	AG5	b	639	654	Right-handed alpha
Helix 60	AG6	b	682	685	Right-handed 310

There are 34 sheets in PDB entry 7ZQP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	37	42	first strand
Strand 2	d	19	28	anti-parallel
Strand 3	d	103	111	anti-parallel
Strand 4	d	128	143	anti-parallel
Strand 5	b	582	586	anti-parallel
Strand 6	b	658	664	anti-parallel
Strand 7	b	704	710	anti-parallel
Strand 8	b	686	698	anti-parallel
Strand 9	b	66	69	anti-parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	60	63	first strand
Strand 2	d	76	82	anti-parallel
Strand 3	d	151	160	anti-parallel
Strand 4	d	128	143	anti-parallel
Strand 5	b	582	586	anti-parallel
Strand 6	b	658	664	anti-parallel
Strand 7	b	704	710	anti-parallel
Strand 8	b	686	698	anti-parallel
Strand 9	b	676	681	anti-parallel
Strand 10	b	571	574	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	48	50	first strand
Strand 2	d	53	55	anti-parallel

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There are 13 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	66	69	first strand
Strand 2	d	686	698	anti-parallel
Strand 3	d	704	709	anti-parallel
Strand 4	d	658	664	anti-parallel
Strand 5	d	582	586	anti-parallel
Strand 6	c	139	143	anti-parallel
Strand 7	c	151	159	anti-parallel
Strand 8	c	128	135	anti-parallel
Strand 9	c	103	111	anti-parallel
Strand 10	c	19	27	anti-parallel
Strand 11	c	38	42	anti-parallel
Strand 12	c	53	57	parallel
Strand 13	c	48	50	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	571	574	first strand
Strand 2	d	676	681	parallel
Strand 3	d	686	698	anti-parallel
Strand 4	d	704	709	anti-parallel
Strand 5	d	658	664	anti-parallel
Strand 6	d	582	586	anti-parallel
Strand 7	c	139	143	anti-parallel
Strand 8	c	151	159	anti-parallel
Strand 9	c	76	82	anti-parallel
Strand 10	c	60	63	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	216	220	first strand
Strand 2	d	249	259	anti-parallel
Strand 3	j	1086	1091	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	216	220	first strand
Strand 2	d	249	259	anti-parallel
Strand 3	d	210	213	anti-parallel
Strand 4	j	1117	1120	anti-parallel
Strand 5	j	1123	1125	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	225	226	first strand
Strand 2	d	243	244	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	266	267	first strand
Strand 2	d	530	531	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	270	274	first strand
Strand 2	d	433	438	anti-parallel
Strand 3	d	304	309	anti-parallel
Strand 4	d	312	313	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	277	282	first strand
Strand 2	d	289	298	anti-parallel
Strand 3	d	414	422	anti-parallel
Strand 4	d	366	370	anti-parallel
Strand 5	d	357	359	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	444	445	first strand
Strand 2	d	451	452	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	550	554	first strand
Strand 2	d	559	563	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	595	602	first strand
Strand 2	d	608	615	anti-parallel
Strand 3	i	1097	1099	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	j	1097	1099	first strand
Strand 2	b	608	615	parallel
Strand 3	b	595	602	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	1086	1092	first strand
Strand 2	b	249	258	parallel
Strand 3	b	211	213	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	1086	1092	first strand
Strand 2	b	249	258	parallel
Strand 3	b	216	220	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	1097	1099	first strand
Strand 2	c	609	615	parallel
Strand 3	c	595	601	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	1118	1120	first strand
Strand 2	h	1123	1125	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	1086	1087	first strand
Strand 2	c	250	253	parallel
Strand 3	c	216	219	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	1090	1092	first strand
Strand 2	c	256	259	parallel
Strand 3	c	210	213	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	1118	1119	first strand
Strand 2	i	1124	1125	anti-parallel

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There are 11 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	66	69	first strand
Strand 2	c	686	698	anti-parallel
Strand 3	c	704	711	anti-parallel
Strand 4	c	657	664	anti-parallel
Strand 5	c	584	586	anti-parallel
Strand 6	b	128	143	anti-parallel
Strand 7	b	103	111	anti-parallel
Strand 8	b	19	28	anti-parallel
Strand 9	b	37	42	anti-parallel
Strand 10	b	53	57	parallel
Strand 11	b	48	50	anti-parallel

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There are 10 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	571	574	first strand
Strand 2	c	676	681	parallel
Strand 3	c	686	698	anti-parallel
Strand 4	c	704	711	anti-parallel
Strand 5	c	657	664	anti-parallel
Strand 6	c	584	586	anti-parallel
Strand 7	b	128	143	anti-parallel
Strand 8	b	151	159	anti-parallel
Strand 9	b	76	82	anti-parallel
Strand 10	b	60	63	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	265	268	first strand
Strand 2	c	529	532	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	271	274	first strand
Strand 2	c	433	437	anti-parallel
Strand 3	c	304	309	anti-parallel
Strand 4	c	312	313	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	276	282	first strand
Strand 2	c	289	296	anti-parallel
Strand 3	c	415	422	anti-parallel
Strand 4	c	364	370	anti-parallel
Strand 5	c	357	361	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	444	445	first strand
Strand 2	c	451	452	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	550	555	first strand
Strand 2	c	558	563	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	266	268	first strand
Strand 2	b	529	531	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	270	274	first strand
Strand 2	b	433	438	anti-parallel
Strand 3	b	304	309	anti-parallel
Strand 4	b	312	313	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	277	282	first strand
Strand 2	b	289	298	anti-parallel
Strand 3	b	414	422	anti-parallel
Strand 4	b	366	371	anti-parallel
Strand 5	b	355	359	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	444	445	first strand
Strand 2	b	451	452	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	550	555	first strand
Strand 2	b	558	563	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZQP

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZQP