Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZQT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZQT entry

There are 6 chains in PDB entry 7ZQT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 44	HIS 463
B	GLN 4	VAL 113
C	GLN 1	SER 195
D	ASP 1	ARG 211
E	ASN 35	SER 462
F	VAL 3	VAL 13

There are 44 helices in PDB entry 7ZQT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	54	Right-handed alpha
Helix 2	AA2	A	55	75	Right-handed alpha
Helix 3	AA3	A	80	101	Right-handed alpha
Helix 4	AA4	A	102	104	Right-handed 310
Helix 5	AA5	A	150	170	Right-handed alpha
Helix 6	AA6	A	198	203	Right-handed alpha
Helix 7	AA7	A	258	277	Right-handed alpha
Helix 8	AA8	A	301	321	Right-handed alpha
Helix 9	AA9	A	321	328	Right-handed alpha
Helix 10	AB1	A	350	376	Right-handed alpha
Helix 11	AB2	A	377	380	Right-handed 310
Helix 12	AB3	A	381	391	Right-handed alpha
Helix 13	AB4	A	425	439	Right-handed alpha
Helix 14	AB5	A	440	463	Right-handed alpha
Helix 15	AB6	B	26	31	Right-handed alpha
Helix 16	AB7	B	87	91	Right-handed 310
Helix 17	AB8	C	28	32	Right-handed 310
Helix 18	AB9	C	87	91	Right-handed 310
Helix 19	AC1	D	79	83	Right-handed 310
Helix 20	AC2	D	121	126	Right-handed alpha
Helix 21	AC3	D	183	187	Right-handed alpha
Helix 22	AC4	E	36	43	Right-handed alpha
Helix 23	AC5	E	43	54	Right-handed alpha
Helix 24	AC6	E	55	75	Right-handed alpha
Helix 25	AC7	E	80	101	Right-handed alpha
Helix 26	AC8	E	149	170	Right-handed alpha
Helix 27	AC9	E	198	203	Right-handed alpha
Helix 28	AD1	E	258	277	Right-handed alpha
Helix 29	AD2	E	301	321	Right-handed alpha
Helix 30	AD3	E	321	328	Right-handed alpha
Helix 31	AD4	E	350	376	Right-handed alpha
Helix 32	AD5	E	381	391	Right-handed alpha
Helix 33	AD6	E	425	439	Right-handed alpha
Helix 34	AD7	E	440	462	Right-handed alpha
Helix 35	AD8	F	26	31	Right-handed alpha
Helix 36	AD9	F	87	91	Right-handed 310
Helix 37	AE1	G	28	32	Right-handed 310
Helix 38	AE2	G	62	65	Right-handed 310
Helix 39	AE3	G	87	91	Right-handed 310
Helix 40	AE4	G	163	165	Right-handed 310
Helix 41	AE5	G	192	196	Right-handed 310
Helix 42	AE6	H	79	83	Right-handed 310
Helix 43	AE7	H	121	126	Right-handed alpha
Helix 44	AE8	H	183	187	Right-handed alpha

There are 30 sheets in PDB entry 7ZQT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	107	first strand
Strand 2	A	148	149	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	130	135	first strand
Strand 2	A	119	127	anti-parallel
Strand 3	A	180	190	anti-parallel
Strand 4	A	245	256	anti-parallel
Strand 5	A	224	232	anti-parallel
Strand 6	A	211	215	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	279	281	first strand
Strand 2	A	295	297	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	8	first strand
Strand 2	B	18	25	anti-parallel
Strand 3	B	78	84	anti-parallel
Strand 4	B	69	73	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	60	first strand
Strand 2	B	48	52	anti-parallel
Strand 3	B	34	38	anti-parallel
Strand 4	B	92	99	anti-parallel
Strand 5	B	109	111	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	8	first strand
Strand 2	C	18	25	anti-parallel
Strand 3	C	78	83	anti-parallel
Strand 4	C	68	73	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	12	first strand
Strand 2	C	114	118	parallel
Strand 3	C	92	99	anti-parallel
Strand 4	C	33	39	anti-parallel
Strand 5	C	45	51	anti-parallel
Strand 6	C	58	60	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	12	first strand
Strand 2	C	114	118	parallel
Strand 3	C	92	99	anti-parallel
Strand 4	C	107	110	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	131	first strand
Strand 2	C	144	152	anti-parallel
Strand 3	C	183	190	anti-parallel
Strand 4	C	170	172	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	131	first strand
Strand 2	C	144	152	anti-parallel
Strand 3	C	183	190	anti-parallel
Strand 4	C	176	177	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	7	first strand
Strand 2	D	19	25	anti-parallel
Strand 3	D	70	75	anti-parallel
Strand 4	D	62	67	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	13	first strand
Strand 2	D	102	106	parallel
Strand 3	D	85	90	anti-parallel
Strand 4	D	33	38	anti-parallel
Strand 5	D	45	49	anti-parallel
Strand 6	D	53	54	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	13	first strand
Strand 2	D	102	106	parallel
Strand 3	D	85	90	anti-parallel
Strand 4	D	97	98	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	114	118	first strand
Strand 2	D	129	139	anti-parallel
Strand 3	D	173	182	anti-parallel
Strand 4	D	159	160	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	153	154	first strand
Strand 2	D	145	150	anti-parallel
Strand 3	D	191	197	anti-parallel
Strand 4	D	205	210	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	130	135	first strand
Strand 2	E	119	127	anti-parallel
Strand 3	E	180	190	anti-parallel
Strand 4	E	245	256	anti-parallel
Strand 5	E	221	232	anti-parallel
Strand 6	E	211	218	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	279	281	first strand
Strand 2	E	295	297	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	8	first strand
Strand 2	F	19	25	anti-parallel
Strand 3	F	78	83	anti-parallel
Strand 4	F	68	73	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	60	first strand
Strand 2	F	47	52	anti-parallel
Strand 3	F	34	40	anti-parallel
Strand 4	F	92	99	anti-parallel
Strand 5	F	110	111	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	7	first strand
Strand 2	G	17	25	anti-parallel
Strand 3	G	78	84	anti-parallel
Strand 4	G	68	73	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	114	118	parallel
Strand 3	G	92	99	anti-parallel
Strand 4	G	33	39	anti-parallel
Strand 5	G	45	51	anti-parallel
Strand 6	G	58	60	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	114	118	parallel
Strand 3	G	92	99	anti-parallel
Strand 4	G	107	110	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	127	131	first strand
Strand 2	G	143	152	anti-parallel
Strand 3	G	183	191	anti-parallel
Strand 4	G	170	172	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	127	131	first strand
Strand 2	G	143	152	anti-parallel
Strand 3	G	183	191	anti-parallel
Strand 4	G	176	177	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	158	161	first strand
Strand 2	G	202	206	anti-parallel
Strand 3	G	213	217	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	6	first strand
Strand 2	H	19	24	anti-parallel
Strand 3	H	70	75	anti-parallel
Strand 4	H	62	67	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	13	first strand
Strand 2	H	102	106	parallel
Strand 3	H	85	90	anti-parallel
Strand 4	H	33	38	anti-parallel
Strand 5	H	45	49	anti-parallel
Strand 6	H	53	54	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	13	first strand
Strand 2	H	102	106	parallel
Strand 3	H	85	90	anti-parallel
Strand 4	H	97	98	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	114	118	first strand
Strand 2	H	129	139	anti-parallel
Strand 3	H	173	182	anti-parallel
Strand 4	H	159	163	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	145	150	first strand
Strand 2	H	192	197	anti-parallel
Strand 3	H	205	209	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZQT

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZQT