Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZQY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZQY entry

There are 4 chains in PDB entry 7ZQY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 600ARG 774
B
GLN 600LEU 776
C
GLN 600ARG 774
D
GLN 600LEU 776
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7ZQY. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
602 639Right-handed alpha
Helix 2
AA2
A
646 648Right-handed 310
Helix 3
AA3
A
649 689Right-handed alpha
Helix 4
AA4
A
701 716Right-handed alpha
Helix 5
AA5
A
718 741Right-handed alpha
Helix 6
AA6
A
741 773Right-handed alpha
Helix 7
AA7
B
601 639Right-handed alpha
Helix 8
AA8
B
646 648Right-handed 310
Helix 9
AA9
B
649 689Right-handed alpha
Helix 10
AB1
B
701 715Right-handed alpha
Helix 11
AB2
B
718 741Right-handed alpha
Helix 12
AB3
B
741 776Right-handed alpha
Helix 13
AB4
C
601 639Right-handed alpha
Helix 14
AB5
C
646 648Right-handed 310
Helix 15
AB6
C
649 689Right-handed alpha
Helix 16
AB7
C
701 714Right-handed alpha
Helix 17
AB8
C
718 741Right-handed alpha
Helix 18
AB9
C
741 773Right-handed alpha
Helix 19
AC1
D
601 639Right-handed alpha
Helix 20
AC2
D
646 648Right-handed 310
Helix 21
AC3
D
649 689Right-handed alpha
Helix 22
AC4
D
701 716Right-handed alpha
Helix 23
AC5
D
718 741Right-handed alpha
Helix 24
AC6
D
741 775Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7ZQY.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
690 691first strand
Strand 2
B
696 697anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il