Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZRE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZRE entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 6 chains in PDB entry 7ZRE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 557
C
 MET 1GLU 190
D
 MET 1GLU 27
B
 GLU 10GLU 161
B
 ALA 163LEU 306
B
 LYS 308VAL 682
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 7ZRE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 32Right-handed alpha
Helix 2
AA2
A
42 51Right-handed alpha
Helix 3
AA3
A
58 83Right-handed alpha
Helix 4
AA4
A
98 111Right-handed alpha
Helix 5
AA5
A
119 123Right-handed 310
Helix 6
AA6
A
125 131Right-handed alpha
Helix 7
AA7
A
133 157Right-handed alpha
Helix 8
AA8
A
165 177Right-handed alpha
Helix 9
AA9
A
178 192Right-handed alpha
Helix 10
AB1
A
218 229Right-handed alpha
Helix 11
AB2
A
248 274Right-handed alpha
Helix 12
AB3
A
276 304Right-handed alpha
Helix 13
AB4
A
306 312Right-handed alpha
Helix 14
AB5
A
328 342Right-handed alpha
Helix 15
AB6
A
355 368Right-handed alpha
Helix 16
AB7
A
377 399Right-handed alpha
Helix 17
AB8
A
410 437Right-handed alpha
Helix 18
AB9
A
438 443Right-handed alpha
Helix 19
AC1
A
449 465Right-handed alpha
Helix 20
AC2
A
478 508Right-handed alpha
Helix 21
AC3
A
523 550Right-handed alpha
Helix 22
AC4
A
550 557Right-handed alpha
Helix 23
AC5
C
3 34Right-handed alpha
Helix 24
AC6
C
91 109Right-handed alpha
Helix 25
AC7
C
133 149Right-handed alpha
Helix 26
AC8
C
151 162Right-handed alpha
Helix 27
AC9
C
168 172Right-handed 310
Helix 28
AD1
C
178 190Right-handed alpha
Helix 29
AD2
D
2 25Right-handed alpha
Helix 30
AD3
B
11 23Right-handed alpha
Helix 31
AD4
B
26 31Right-handed alpha
Helix 32
AD5
B
33 56Right-handed alpha
Helix 33
AD6
B
63 103Right-handed alpha
Helix 34
AD7
B
155 160Right-handed alpha
Helix 35
AD8
B
198 208Right-handed alpha
Helix 36
AD9
B
215 246Right-handed alpha
Helix 37
AE1
B
251 263Right-handed alpha
Helix 38
AE2
B
265 284Right-handed alpha
Helix 39
AE3
B
291 301Right-handed alpha
Helix 40
AE4
B
329 342Right-handed alpha
Helix 41
AE5
B
346 361Right-handed alpha
Helix 42
AE6
B
366 371Right-handed alpha
Helix 43
AE7
B
397 407Right-handed alpha
Helix 44
AE8
B
415 427Right-handed alpha
Helix 45
AE9
B
452 463Right-handed alpha
Helix 46
AF1
B
474 486Right-handed alpha
Helix 47
AF2
B
495 508Right-handed alpha
Helix 48
AF3
B
522 529Right-handed alpha
Helix 49
AF4
B
539 546Right-handed alpha
Helix 50
AF5
B
556 582Right-handed alpha
Helix 51
AF6
B
582 595Right-handed alpha
Helix 52
AF7
B
599 606Right-handed 310
Helix 53
AF8
B
612 631Right-handed alpha
Helix 54
AF9
B
631 638Right-handed alpha
Helix 55
AG1
B
645 680Right-handed alpha
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There are 9 sheets in PDB entry 7ZRE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 205first strand
Strand 2
A
211 214anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 404first strand
Strand 2
A
407 408anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
42 44first strand
Strand 2
C
49 52anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 132first strand
Strand 2
C
175 177anti-parallel
Strand 3
C
163 164anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 120first strand
Strand 2
B
107 108anti-parallel
Strand 3
B
132 133anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 145first strand
Strand 2
B
190 191anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 168first strand
Strand 2
B
150 154anti-parallel
Strand 3
B
181 182anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
287 288first strand
Strand 2
B
548 550anti-parallel
Strand 3
B
531 535parallel
Strand 4
B
513 518parallel
Strand 5
B
303 308parallel
Strand 6
B
466 471parallel
Strand 7
B
489 491parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
317 319first strand
Strand 2
B
439 447anti-parallel
Strand 3
B
429 434anti-parallel
Strand 4
B
395 396anti-parallel
Strand 5
B
383 387anti-parallel
Strand 6
B
373 378anti-parallel
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