Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZRJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZRJ entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 5 chains in PDB entry 7ZRJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 557
C
 MET 1GLU 190
D
 MET 1GLU 27
B
 LEU 8GLU 161
B
 ALA 163VAL 682
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 7ZRJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 32Right-handed alpha
Helix 2
AA2
A
39 51Right-handed alpha
Helix 3
AA3
A
58 82Right-handed alpha
Helix 4
AA4
A
98 111Right-handed alpha
Helix 5
AA5
A
119 124Right-handed alpha
Helix 6
AA6
A
125 131Right-handed alpha
Helix 7
AA7
A
131 157Right-handed alpha
Helix 8
AA8
A
165 177Right-handed alpha
Helix 9
AA9
A
179 193Right-handed alpha
Helix 10
AB1
A
218 228Right-handed alpha
Helix 11
AB2
A
248 274Right-handed alpha
Helix 12
AB3
A
277 305Right-handed alpha
Helix 13
AB4
A
307 312Right-handed alpha
Helix 14
AB5
A
328 342Right-handed alpha
Helix 15
AB6
A
350 354Right-handed 310
Helix 16
AB7
A
355 368Right-handed alpha
Helix 17
AB8
A
377 399Right-handed alpha
Helix 18
AB9
A
410 435Right-handed alpha
Helix 19
AC1
A
438 443Right-handed alpha
Helix 20
AC2
A
449 465Right-handed alpha
Helix 21
AC3
A
478 495Right-handed alpha
Helix 22
AC4
A
496 510Right-handed alpha
Helix 23
AC5
A
524 538Right-handed alpha
Helix 24
AC6
A
543 549Right-handed alpha
Helix 25
AC7
A
550 556Right-handed alpha
Helix 26
AC8
C
3 19Right-handed alpha
Helix 27
AC9
C
21 34Right-handed alpha
Helix 28
AD1
C
34 39Right-handed alpha
Helix 29
AD2
C
91 109Right-handed alpha
Helix 30
AD3
C
133 140Right-handed alpha
Helix 31
AD4
C
140 149Right-handed alpha
Helix 32
AD5
C
151 162Right-handed alpha
Helix 33
AD6
C
178 190Right-handed alpha
Helix 34
AD7
D
5 25Right-handed alpha
Helix 35
AD8
B
14 22Right-handed alpha
Helix 36
AD9
B
26 30Right-handed 310
Helix 37
AE1
B
33 56Right-handed alpha
Helix 38
AE2
B
62 99Right-handed alpha
Helix 39
AE3
B
156 160Right-handed alpha
Helix 40
AE4
B
198 210Right-handed alpha
Helix 41
AE5
B
215 246Right-handed alpha
Helix 42
AE6
B
251 263Right-handed alpha
Helix 43
AE7
B
264 271Right-handed alpha
Helix 44
AE8
B
272 285Right-handed alpha
Helix 45
AE9
B
291 300Right-handed alpha
Helix 46
AF1
B
307 311Right-handed 310
Helix 47
AF2
B
329 342Right-handed alpha
Helix 48
AF3
B
346 360Right-handed alpha
Helix 49
AF4
B
397 408Right-handed alpha
Helix 50
AF5
B
413 427Right-handed alpha
Helix 51
AF6
B
452 463Right-handed alpha
Helix 52
AF7
B
474 484Right-handed alpha
Helix 53
AF8
B
495 509Right-handed alpha
Helix 54
AF9
B
522 529Right-handed alpha
Helix 55
AG1
B
539 546Right-handed alpha
Helix 56
AG2
B
554 556Right-handed 310
Helix 57
AG3
B
557 582Right-handed alpha
Helix 58
AG4
B
582 595Right-handed alpha
Helix 59
AG5
B
599 605Right-handed 310
Helix 60
AG6
B
612 637Right-handed alpha
Helix 61
AG7
B
645 661Right-handed alpha
Helix 62
AG8
B
663 680Right-handed alpha
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There are 10 sheets in PDB entry 7ZRJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 205first strand
Strand 2
A
211 214anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 404first strand
Strand 2
A
407 408anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
42 44first strand
Strand 2
C
49 52anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 132first strand
Strand 2
C
175 177anti-parallel
Strand 3
C
163 164anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 134first strand
Strand 2
B
187 191anti-parallel
Strand 3
B
144 145anti-parallel
Strand 4
B
175 176anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 139first strand
Strand 2
B
181 182anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 155first strand
Strand 2
B
161 166anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
287 289first strand
Strand 2
B
548 550anti-parallel
Strand 3
B
533 535parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
489 491first strand
Strand 2
B
466 470parallel
Strand 3
B
303 306parallel
Strand 4
B
513 515parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
393 396first strand
Strand 2
B
432 435anti-parallel
Strand 3
B
438 442anti-parallel
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