Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZRL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZRL entry

There are 5 chains in PDB entry 7ZRL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 557
B
 PHE 9LEU 306
B
 LYS 308VAL 682
C
 SER 2GLU 190
D
 MET 1GLU 27
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 7ZRL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 33Right-handed alpha
Helix 2
AA2
A
39 51Right-handed alpha
Helix 3
AA3
A
58 83Right-handed alpha
Helix 4
AA4
A
98 110Right-handed alpha
Helix 5
AA5
A
125 131Right-handed alpha
Helix 6
AA6
A
131 157Right-handed alpha
Helix 7
AA7
A
165 175Right-handed alpha
Helix 8
AA8
A
178 193Right-handed alpha
Helix 9
AA9
A
218 227Right-handed alpha
Helix 10
AB1
A
248 274Right-handed alpha
Helix 11
AB2
A
276 296Right-handed alpha
Helix 12
AB3
A
297 305Right-handed alpha
Helix 13
AB4
A
306 312Right-handed alpha
Helix 14
AB5
A
329 342Right-handed alpha
Helix 15
AB6
A
350 354Right-handed 310
Helix 16
AB7
A
356 369Right-handed alpha
Helix 17
AB8
A
377 399Right-handed alpha
Helix 18
AB9
A
410 438Right-handed alpha
Helix 19
AC1
A
440 445Right-handed 310
Helix 20
AC2
A
449 465Right-handed alpha
Helix 21
AC3
A
478 509Right-handed alpha
Helix 22
AC4
A
524 549Right-handed alpha
Helix 23
AC5
A
550 557Right-handed alpha
Helix 24
AC6
B
11 24Right-handed alpha
Helix 25
AC7
B
26 31Right-handed alpha
Helix 26
AC8
B
33 56Right-handed alpha
Helix 27
AC9
B
62 88Right-handed alpha
Helix 28
AD1
B
94 103Right-handed alpha
Helix 29
AD2
B
122 126Right-handed 310
Helix 30
AD3
B
198 209Right-handed alpha
Helix 31
AD4
B
215 243Right-handed alpha
Helix 32
AD5
B
251 263Right-handed alpha
Helix 33
AD6
B
264 282Right-handed alpha
Helix 34
AD7
B
283 285Right-handed 310
Helix 35
AD8
B
291 298Right-handed alpha
Helix 36
AD9
B
307 312Right-handed alpha
Helix 37
AE1
B
329 341Right-handed alpha
Helix 38
AE2
B
346 360Right-handed alpha
Helix 39
AE3
B
397 409Right-handed alpha
Helix 40
AE4
B
413 427Right-handed alpha
Helix 41
AE5
B
436 440Right-handed 310
Helix 42
AE6
B
452 464Right-handed alpha
Helix 43
AE7
B
474 486Right-handed alpha
Helix 44
AE8
B
495 509Right-handed alpha
Helix 45
AE9
B
522 529Right-handed alpha
Helix 46
AF1
B
539 545Right-handed alpha
Helix 47
AF2
B
557 591Right-handed alpha
Helix 48
AF3
B
592 595Right-handed 310
Helix 49
AF4
B
599 607Right-handed 310
Helix 50
AF5
B
612 636Right-handed alpha
Helix 51
AF6
B
645 680Right-handed alpha
Helix 52
AF7
C
3 20Right-handed alpha
Helix 53
AF8
C
20 34Right-handed alpha
Helix 54
AF9
C
34 39Right-handed alpha
Helix 55
AG1
C
91 109Right-handed alpha
Helix 56
AG2
C
133 139Right-handed alpha
Helix 57
AG3
C
140 149Right-handed alpha
Helix 58
AG4
C
151 162Right-handed alpha
Helix 59
AG5
C
178 190Right-handed alpha
Helix 60
AG6
D
4 25Right-handed alpha
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There are 8 sheets in PDB entry 7ZRL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 204first strand
Strand 2
A
212 214anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 404first strand
Strand 2
A
407 408anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 121first strand
Strand 2
B
106 109anti-parallel
Strand 3
B
131 133anti-parallel
Strand 4
B
188 190anti-parallel
Strand 5
B
145 148anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 166first strand
Strand 2
B
151 154anti-parallel
Strand 3
B
182 185anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
287 289first strand
Strand 2
B
548 550anti-parallel
Strand 3
B
531 535parallel
Strand 4
B
512 516parallel
Strand 5
B
301 306parallel
Strand 6
B
466 469parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
318 319first strand
Strand 2
B
442 446anti-parallel
Strand 3
B
428 433anti-parallel
Strand 4
B
391 396anti-parallel
Strand 5
B
383 388anti-parallel
Strand 6
B
373 375anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
42 45first strand
Strand 2
C
48 52anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 132first strand
Strand 2
C
175 177anti-parallel
Strand 3
C
163 164anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il