Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZRM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZRM entry

There are 5 chains in PDB entry 7ZRM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 557
C
 MET 1GLU 190
D
 MET 1GLU 27
B
 ALA 7LEU 306
B
 LYS 308VAL 682
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 54 helices in PDB entry 7ZRM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 32Right-handed alpha
Helix 2
AA2
A
41 51Right-handed alpha
Helix 3
AA3
A
58 83Right-handed alpha
Helix 4
AA4
A
98 111Right-handed alpha
Helix 5
AA5
A
125 132Right-handed alpha
Helix 6
AA6
A
133 157Right-handed alpha
Helix 7
AA7
A
165 177Right-handed alpha
Helix 8
AA8
A
177 193Right-handed alpha
Helix 9
AA9
A
218 229Right-handed alpha
Helix 10
AB1
A
248 274Right-handed alpha
Helix 11
AB2
A
277 305Right-handed alpha
Helix 12
AB3
A
306 312Right-handed alpha
Helix 13
AB4
A
328 342Right-handed alpha
Helix 14
AB5
A
355 368Right-handed alpha
Helix 15
AB6
A
377 399Right-handed alpha
Helix 16
AB7
A
410 437Right-handed alpha
Helix 17
AB8
A
438 443Right-handed alpha
Helix 18
AB9
A
449 465Right-handed alpha
Helix 19
AC1
A
478 509Right-handed alpha
Helix 20
AC2
A
523 550Right-handed alpha
Helix 21
AC3
A
550 557Right-handed alpha
Helix 22
AC4
C
3 21Right-handed alpha
Helix 23
AC5
C
21 34Right-handed alpha
Helix 24
AC6
C
34 39Right-handed alpha
Helix 25
AC7
C
91 109Right-handed alpha
Helix 26
AC8
C
133 140Right-handed alpha
Helix 27
AC9
C
140 148Right-handed alpha
Helix 28
AD1
C
151 162Right-handed alpha
Helix 29
AD2
C
178 190Right-handed alpha
Helix 30
AD3
D
2 25Right-handed alpha
Helix 31
AD4
B
11 25Right-handed alpha
Helix 32
AD5
B
29 32Right-handed 310
Helix 33
AD6
B
33 55Right-handed alpha
Helix 34
AD7
B
61 97Right-handed alpha
Helix 35
AD8
B
122 126Right-handed 310
Helix 36
AD9
B
198 207Right-handed alpha
Helix 37
AE1
B
215 247Right-handed alpha
Helix 38
AE2
B
251 263Right-handed alpha
Helix 39
AE3
B
264 285Right-handed alpha
Helix 40
AE4
B
291 298Right-handed alpha
Helix 41
AE5
B
330 341Right-handed alpha
Helix 42
AE6
B
346 361Right-handed alpha
Helix 43
AE7
B
397 409Right-handed alpha
Helix 44
AE8
B
413 427Right-handed alpha
Helix 45
AE9
B
452 464Right-handed alpha
Helix 46
AF1
B
474 484Right-handed alpha
Helix 47
AF2
B
495 509Right-handed alpha
Helix 48
AF3
B
522 529Right-handed alpha
Helix 49
AF4
B
539 546Right-handed alpha
Helix 50
AF5
B
557 595Right-handed alpha
Helix 51
AF6
B
599 606Right-handed 310
Helix 52
AF7
B
612 638Right-handed alpha
Helix 53
AF8
B
645 658Right-handed alpha
Helix 54
AF9
B
658 680Right-handed alpha
Back to top of page

There are 11 sheets in PDB entry 7ZRM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 205first strand
Strand 2
A
211 214anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 404first strand
Strand 2
A
407 408anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
42 45first strand
Strand 2
C
48 52anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 132first strand
Strand 2
C
175 177anti-parallel
Strand 3
C
163 164anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 107first strand
Strand 2
B
120 121anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 134first strand
Strand 2
B
187 190anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 145first strand
Strand 2
B
175 176anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 168first strand
Strand 2
B
150 154anti-parallel
Strand 3
B
181 182anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
287 289first strand
Strand 2
B
548 550anti-parallel
Strand 3
B
531 534parallel
Strand 4
B
513 517parallel
Strand 5
B
303 306parallel
Strand 6
B
466 469parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
319 322first strand
Strand 2
B
439 446anti-parallel
Strand 3
B
432 434anti-parallel
Strand 4
B
394 396anti-parallel
Strand 5
B
383 385anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
319 322first strand
Strand 2
B
439 446anti-parallel
Strand 3
B
428 429anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il