Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZSQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZSQ entry

There are 3 chains in PDB entry 7ZSQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7PHE 268
B
 ASP 7ARG 269
C
 VAL 1PHE 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 30 helices in PDB entry 7ZSQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 24Right-handed alpha
Helix 2
AA2
A
38 45Right-handed 310
Helix 3
AA3
A
55 57Right-handed 310
Helix 4
AA4
A
90 94Right-handed 310
Helix 5
AA5
A
96 110Right-handed alpha
Helix 6
AA6
A
161 172Right-handed alpha
Helix 7
AA7
A
190 200Right-handed alpha
Helix 8
AA8
A
209 219Right-handed alpha
Helix 9
AA9
A
242 267Right-handed alpha
Helix 10
AB1
B
8 24Right-handed alpha
Helix 11
AB2
B
38 40Right-handed 310
Helix 12
AB3
B
41 46Right-handed alpha
Helix 13
AB4
B
55 57Right-handed 310
Helix 14
AB5
B
90 94Right-handed 310
Helix 15
AB6
B
96 101Right-handed alpha
Helix 16
AB7
B
101 110Right-handed alpha
Helix 17
AB8
B
161 172Right-handed alpha
Helix 18
AB9
B
190 201Right-handed alpha
Helix 19
AC1
B
209 219Right-handed alpha
Helix 20
AC2
B
242 269Right-handed alpha
Helix 21
AC3
C
7 24Right-handed alpha
Helix 22
AC4
C
38 40Right-handed 310
Helix 23
AC5
C
41 46Right-handed alpha
Helix 24
AC6
C
55 57Right-handed 310
Helix 25
AC7
C
90 94Right-handed 310
Helix 26
AC8
C
96 110Right-handed alpha
Helix 27
AC9
C
161 172Right-handed alpha
Helix 28
AD1
C
190 200Right-handed alpha
Helix 29
AD2
C
209 219Right-handed alpha
Helix 30
AD3
C
242 267Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 7ZSQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 53first strand
Strand 2
A
71 77anti-parallel
Strand 3
A
80 86anti-parallel
Strand 4
A
30 34parallel
Strand 5
A
114 123parallel
Strand 6
A
222 232parallel
Strand 7
A
133 141anti-parallel
Strand 8
A
176 182parallel
Strand 9
A
204 206parallel
Strand 10
A
114 123anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 53first strand
Strand 2
B
71 77anti-parallel
Strand 3
B
80 86anti-parallel
Strand 4
B
30 34parallel
Strand 5
B
114 123parallel
Strand 6
B
222 232parallel
Strand 7
B
133 141anti-parallel
Strand 8
B
176 182parallel
Strand 9
B
204 206parallel
Strand 10
B
114 123anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
50 53first strand
Strand 2
C
71 77anti-parallel
Strand 3
C
80 86anti-parallel
Strand 4
C
30 34parallel
Strand 5
C
114 123parallel
Strand 6
C
222 232parallel
Strand 7
C
133 141anti-parallel
Strand 8
C
176 182parallel
Strand 9
C
204 206parallel
Strand 10
C
114 123anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il