Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZTH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZTH entry

There are 6 chains in PDB entry 7ZTH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 105SER 308
A
 SER 310PHE 464
B
 ASP 103SER 308
B
 SER 310PHE 464
C
 G 3 T 43
D
 A 6 C 46
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 31 helices in PDB entry 7ZTH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
120 125Right-handed alpha
Helix 2
AA2
A
126 129Right-handed 310
Helix 3
AA3
A
148 159Right-handed alpha
Helix 4
AA4
A
178 190Right-handed alpha
Helix 5
AA5
A
204 209Right-handed alpha
Helix 6
AA6
A
228 233Right-handed alpha
Helix 7
AA7
A
255 267Right-handed alpha
Helix 8
AA8
A
312 316Right-handed 310
Helix 9
AA9
A
323 334Right-handed alpha
Helix 10
AB1
A
342 346Right-handed 310
Helix 11
AB2
A
347 352Right-handed alpha
Helix 12
AB3
A
361 381Right-handed alpha
Helix 13
AB4
A
407 416Right-handed alpha
Helix 14
AB5
A
417 419Right-handed 310
Helix 15
AB6
A
447 449Right-handed 310
Helix 16
AB7
A
450 463Right-handed alpha
Helix 17
AB8
B
120 132Right-handed alpha
Helix 18
AB9
B
150 156Right-handed alpha
Helix 19
AC1
B
158 163Right-handed alpha
Helix 20
AC2
B
178 183Right-handed alpha
Helix 21
AC3
B
207 211Right-handed 310
Helix 22
AC4
B
227 232Right-handed alpha
Helix 23
AC5
B
254 266Right-handed alpha
Helix 24
AC6
B
291 296Right-handed alpha
Helix 25
AC7
B
323 334Right-handed alpha
Helix 26
AC8
B
350 355Right-handed alpha
Helix 27
AC9
B
358 380Right-handed alpha
Helix 28
AD1
B
381 383Right-handed 310
Helix 29
AD2
B
407 415Right-handed alpha
Helix 30
AD3
B
447 449Right-handed 310
Helix 31
AD4
B
450 462Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 7ZTH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 175first strand
Strand 2
A
318 321anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 219first strand
Strand 2
A
194 198parallel
Strand 3
A
238 241parallel
Strand 4
A
272 275parallel
Strand 5
A
301 302parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 390first strand
Strand 2
A
397 402anti-parallel
Strand 3
A
438 442anti-parallel
Strand 4
A
423 424anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 217first strand
Strand 2
B
194 196parallel
Strand 3
B
238 241parallel
Strand 4
B
272 275parallel
Strand 5
B
301 306parallel
Strand 6
B
318 321anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
221 222first strand
Strand 2
B
225 226anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
389 390first strand
Strand 2
B
397 400anti-parallel
Strand 3
B
439 442anti-parallel
Strand 4
B
423 424anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il